RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 KCNS3Q9BQ31 491 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 PRSS27Q9BQR3 290 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 THTPAQ9BU02 230 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 TMEM243Q9BU79 118 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 CCDC106Q9BWC9 280 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 TEX12Q9BXU0 123 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 ITPAQ9BY32 194 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 SAMD10Q9BYL1 202 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 NDEL1Q9GZM8 345 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 COMMD5Q9GZQ3 224 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 CYP4F30PQ9H0H9 118 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 NAPBQ9H115 298 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 RBKSQ9H477 322 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 LMAN1LQ9HAT1 526 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 TMEM27Q9HBJ8 222 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 SND1-IT1Q9HBX3 110 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 ZCCHC17Q9NP64 241 aaKnown RBP-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 WASH6PQ9NQA3 447 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 TMEM38BQ9NVV0 291 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 ZNHIT6Q9NWK9 470 aaKnown RBP-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC39A1Q9NY26 324 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 UTP6Q9NYH9 597 aaKnown RBP-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 AIPL1Q9NZN9 384 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 TMEM14CQ9P0S9 112 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 HSPB8Q9UJY1 196 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 TMCO1Q9UM00 188 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 GPR132Q9UNW8 380 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 RNF11Q9Y3C5 154 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 KCNE3Q9Y6H6 103 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 CSMD1Q96PZ7 3565 aa-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 URB1O60287 2271 aaKnown RBP-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 MYH14Q7Z406 1995 aaKnown RBP-0.68□□□□□ -2.52
TRAJ28-201ENST00000390509 KDM5BQ9UGL1 1544 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 CHD7Q9P2D1 2997 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 MTUS2Q5JR59 1369 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 CHD3Q12873 2000 aaKnown RBP-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 TET2Q6N021 2002 aaPredicted RBP-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 SPTBN1Q01082 2364 aaKnown RBP-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 SRCAPQ6ZRS2 3230 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 LAMC3Q9Y6N6 1575 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 FHOD3Q2V2M9 1422 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 PTPRUQ92729 1446 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 ERBINQ96RT1 1412 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 SETD5Q9C0A6 1442 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 A0A087WTM6 91 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 A0A087WV48 116 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 SMIM26A0A096LP01 95 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 IGHV3-73A0A0B4J1V6 119 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 A0A0G2JMP0 313 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 A0A0X1KG70 313 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 IGSF23A1L1A6 192 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 DPRXA6NFQ7 191 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 TLCD2A6NGC4 264 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 SMIM9A6NGZ8 99 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 FAM74A7A6NL05 159 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 A6NLC8 198 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 LRRC30A6NM36 301 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 TMEM212A6NML5 194 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 HMSDA8MTL9 139 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 PDZK1P1A8MUH7 402 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 A8MWP6 167 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 C9JQL5 133 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 H0Y626 953 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 H3BTX0 84 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 EIF3FO00303 357 aaPredicted RBP-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 ISLRO14498 428 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 HSD17B6O14756 317 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 LECT2O14960 151 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 ANGPT2O15123 496 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 CTDSPLO15194 276 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 MAGEB3O15480 346 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 ORC5O43913 435 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 NME2P1O60361 137 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 CTNSO60931 367 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 RDH16O75452 317 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 GMNNO75496 209 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 KLF7O75840 302 aaPredicted RBP-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 SMC2O95347 1197 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 DNAL4O96015 105 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 TGFAP01135 160 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 IGLV3-27P01718 113 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 RPN1P04843 607 aaKnown RBP-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 REG1AP05451 166 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 SERPIND1P05546 499 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 UCHL1P09936 223 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 SEC11BP0C7V7 166 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 UBBP0CG47 229 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 OR5H8P0DN80 308 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 TROVE2P10155 538 aaKnown RBP eCLIP-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 CTSEP14091 401 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 IFNAR1P17181 557 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 PCMT1P22061 227 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC2A5P22732 501 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 IVDP26440 423 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 HTR2AP28223 471 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 TEAD1P28347 426 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 SERPINB3P29508 390 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 GNRHRP30968 328 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 BRS3P32247 399 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms