RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 SOX2P48431 317 aa13.57□□□□□ -0.24
SNRPB-201ENST00000381342 TAS2R43P59537 309 aa13.57□□□□□ -0.24
SNRPB-201ENST00000381342 UBE2V2Q15819 145 aa13.57□□□□□ -0.24
SNRPB-201ENST00000381342 WDR82Q6UXN9 313 aa13.57□□□□□ -0.24
SNRPB-201ENST00000381342 PRSS48Q7RTY5 328 aa13.57□□□□□ -0.24
SNRPB-201ENST00000381342 PRIMA1Q86XR5 153 aa13.57□□□□□ -0.24
SNRPB-201ENST00000381342 SCCPDHQ8NBX0 429 aa13.57□□□□□ -0.24
SNRPB-201ENST00000381342 OR5A2Q8NGI9 324 aa13.57□□□□□ -0.24
SNRPB-201ENST00000381342 LRRC29Q8WV35 223 aa13.57□□□□□ -0.24
SNRPB-201ENST00000381342 PP6455Q8WZ26 134 aa13.57□□□□□ -0.24
SNRPB-201ENST00000381342 C10orf35Q96D05 121 aa13.57□□□□□ -0.24
SNRPB-201ENST00000381342 MSI2Q96DH6 328 aaKnown RBP13.57□□□□□ -0.24
SNRPB-201ENST00000381342 PGLYRP3Q96LB9 341 aa13.57□□□□□ -0.24
SNRPB-201ENST00000381342 DHDHQ9UQ10 334 aa13.57□□□□□ -0.24
SNRPB-201ENST00000381342 LRCH1Q9Y2L9 728 aa13.57□□□□□ -0.24
SNRPB-201ENST00000381342 NSD1Q96L73 2696 aaPredicted RBP13.56□□□□□ -0.24
SNRPB-201ENST00000381342 FAM230AA0A1W2PPH8 454 aa13.56□□□□□ -0.24
SNRPB-201ENST00000381342 PQLC2LA1A4F0 135 aa13.56□□□□□ -0.24
SNRPB-201ENST00000381342 C3orf80F5H4A9 247 aa13.56□□□□□ -0.24
SNRPB-201ENST00000381342 CDIPTO14735 213 aa13.56□□□□□ -0.24
SNRPB-201ENST00000381342 MAP2K4P45985 399 aa13.56□□□□□ -0.24
SNRPB-201ENST00000381342 GABARAPL2P60520 117 aa13.56□□□□□ -0.24
SNRPB-201ENST00000381342 SPHARQ15513 63 aa13.56□□□□□ -0.24
SNRPB-201ENST00000381342 MED22Q15528 200 aa13.56□□□□□ -0.24
SNRPB-201ENST00000381342 GCSAMQ8N6F7 178 aa13.56□□□□□ -0.24
SNRPB-201ENST00000381342 LINC01356Q8N9X3 169 aa13.56□□□□□ -0.24
SNRPB-201ENST00000381342 OR13C9Q8NGT0 318 aa13.56□□□□□ -0.24
SNRPB-201ENST00000381342 GPR148Q8TDV2 347 aa13.56□□□□□ -0.24
SNRPB-201ENST00000381342 GHSRQ92847 366 aa13.56□□□□□ -0.24
SNRPB-201ENST00000381342 OR51I2Q9H344 312 aa13.56□□□□□ -0.24
SNRPB-201ENST00000381342 IGKV1-9A0A0C4DH69 117 aa13.55□□□□□ -0.24
SNRPB-201ENST00000381342 RHBDL1O75783 438 aa13.55□□□□□ -0.24
SNRPB-201ENST00000381342 IGHV2-5P01817 119 aa13.55□□□□□ -0.24
SNRPB-201ENST00000381342 FAM157CP0CG43 387 aa13.55□□□□□ -0.24
SNRPB-201ENST00000381342 CELP19835 753 aa13.55□□□□□ -0.24
SNRPB-201ENST00000381342 PCMT1P22061 227 aa13.55□□□□□ -0.24
SNRPB-201ENST00000381342 MDH2P40926 338 aaKnown RBP13.55□□□□□ -0.24
SNRPB-201ENST00000381342 GMFBP60983 142 aa13.55□□□□□ -0.24
SNRPB-201ENST00000381342 LMO4P61968 165 aa13.55□□□□□ -0.24
SNRPB-201ENST00000381342 BDH1Q02338 343 aa13.55□□□□□ -0.24
SNRPB-201ENST00000381342 CNN3Q15417 329 aaKnown RBP13.55□□□□□ -0.24
SNRPB-201ENST00000381342 FAM76BQ5HYJ3 339 aa13.55□□□□□ -0.24
SNRPB-201ENST00000381342 HAGHLQ6PII5 290 aaPredicted RBP13.55□□□□□ -0.24
SNRPB-201ENST00000381342 ZNF665Q9H7R5 613 aa13.55□□□□□ -0.24
SNRPB-201ENST00000381342 SLC7A11Q9UPY5 501 aa13.55□□□□□ -0.24
SNRPB-201ENST00000381342 ZNF281Q9Y2X9 895 aa13.55□□□□□ -0.24
SNRPB-201ENST00000381342 IGKV1-27A0A075B6S5 117 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 PPIAL4EA0A075B759 164 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 KIAA1324LA8MWY0 1029 aaPredicted RBP13.54□□□□□ -0.24
SNRPB-201ENST00000381342 PPIAL4DF5H284 164 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 J3QT63 122 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 SERPINA3P01011 423 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 RPSAP08865 295 aaKnown RBP13.54□□□□□ -0.24
SNRPB-201ENST00000381342 PPIAL4FP0DN26 164 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 ATF1P18846 271 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 AZGP1P25311 298 aaKnown RBP13.54□□□□□ -0.24
SNRPB-201ENST00000381342 HAAOP46952 286 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 ACSM1Q08AH1 577 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 TBCEQ15813 527 aaPredicted RBP13.54□□□□□ -0.24
SNRPB-201ENST00000381342 ZNF404Q494X3 552 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 TMEM155Q4W5P6 130 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 SFRP4Q6FHJ7 346 aaPredicted RBP13.54□□□□□ -0.24
SNRPB-201ENST00000381342 UTS2BQ765I0 119 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 LRRC28Q86X40 367 aaPredicted RBP13.54□□□□□ -0.24
SNRPB-201ENST00000381342 DEFB108BQ8NET1 73 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 AQP3Q92482 292 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 TECTBQ96PL2 329 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 PPIAL4AQ9Y536 164 aa13.54□□□□□ -0.24
SNRPB-201ENST00000381342 IGHV3OR15-7A0A075B7D8 119 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 CEACAM18A8MTB9 384 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 SRRM5B3KS81 715 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 FAM157AC9JC47 383 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.53□□□□□ -0.24
SNRPB-201ENST00000381342 LGALS8O00214 317 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 AKR7A2O43488 359 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 PLPP2O43688 288 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 SYNGR1O43759 233 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 PLATP00750 562 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 LHBP01229 141 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 OCM2P0CE71 109 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 HSMCR30P0CW71 290 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 SRD5A1P18405 259 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 RPS11P62280 158 aaKnown RBP eCLIP13.53□□□□□ -0.24
SNRPB-201ENST00000381342 ASPHD2Q6ICH7 369 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 ANGPTL5Q86XS5 388 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 ZNF573Q86YE8 665 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 CALHM1Q8IU99 346 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 MUC20Q8N307 709 aaPredicted RBP13.53□□□□□ -0.24
SNRPB-201ENST00000381342 SPICQ8N5J4 248 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 PARP16Q8N5Y8 322 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 TMEM106AQ96A25 262 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 ORAI1Q96D31 301 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 RAB39BQ96DA2 213 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 SEH1LQ96EE3 360 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 BORCS8Q96FH0 119 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 OR14A2Q96R54 314 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 TMEM246Q9BRR3 403 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 ZCCHC4Q9H5U6 513 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 TMEM165Q9HC07 324 aa13.53□□□□□ -0.24
SNRPB-201ENST00000381342 TAS2R4Q9NYW5 299 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms