RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CD27P26842 260 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 SNCAP37840 140 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 RPS23P62266 143 aaKnown RBP12.24□□□□□ -0.45
SDC1-202ENST00000381150 SUPT4H1P63272 117 aaKnown RBP12.24□□□□□ -0.45
SDC1-202ENST00000381150 PHLDA2Q53GA4 152 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 MAMDC2Q7Z304 686 aaPredicted RBP12.24□□□□□ -0.45
SDC1-202ENST00000381150 LRP11Q86VZ4 500 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 SLC26A10Q8NG04 563 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 LMX1AQ8TE12 382 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 MRPL24Q96A35 216 aaKnown RBP12.24□□□□□ -0.45
SDC1-202ENST00000381150 PRRX2Q99811 253 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 PBDC1Q9BVG4 233 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 LMAN1LQ9HAT1 526 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 GPR132Q9UNW8 380 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 BORCS7-ASMTA0A0B4J1R7 106 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 ZNF217O75362 1048 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 IL11P20809 199 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 GABRR1P24046 479 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 HSD11B1P28845 292 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 RPL27P61353 136 aaKnown RBP12.23□□□□□ -0.45
SDC1-202ENST00000381150 SRSF4Q08170 494 aaKnown RBP12.23□□□□□ -0.45
SDC1-202ENST00000381150 PNLIPRP3Q17RR3 467 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 TSTD1Q8NFU3 115 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 OR5D14Q8NGL3 314 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 THAP3Q8WTV1 239 aaPredicted RBP12.23□□□□□ -0.45
SDC1-202ENST00000381150 SLC35B3Q9H1N7 401 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 WASF3Q9UPY6 502 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 R4GMQ9 66 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 A0A087WZY1 265 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 H3BML4 177 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 SCAF4O95104 1147 aaKnown RBP12.23□□□□□ -0.45
SDC1-202ENST00000381150 IL12BP29460 328 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 BLVRBP30043 206 aaPredicted RBP12.23□□□□□ -0.45
SDC1-202ENST00000381150 NHLH2Q02577 135 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 HMGN3Q15651 99 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 OGFOD3Q6PK18 319 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 MEX3BQ6ZN04 569 aaKnown RBP12.23□□□□□ -0.45
SDC1-202ENST00000381150 SULF2Q8IWU5 870 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 ARRDC1Q8N5I2 433 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 ZNF610Q8N9Z0 462 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 LRRC75AQ8NAA5 344 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 OR13G1Q8NGZ3 307 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 RTN4RQ9BZR6 473 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 PPP4R1LQ9P1A2 415 aa12.23□□□□□ -0.45
SDC1-202ENST00000381150 SOX15O60248 233 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 RAD51DO75771 328 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 F10P00742 488 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 HEXBP07686 556 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 EFNA3P52797 238 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 SLC37A1P57057 533 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 PLAC9Q5JTB6 97 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 DPPA2Q7Z7J5 298 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 FAM221AA4D161 298 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 TLCD2A6NGC4 264 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 NPIPA5E9PKD4 350 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 PPIHO43447 177 aaKnown RBP12.22□□□□□ -0.45
SDC1-202ENST00000381150 NR2C1P13056 603 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 CDX1P47902 265 aaPredicted RBP12.22□□□□□ -0.45
SDC1-202ENST00000381150 RBP2P50120 134 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 POU3F1Q03052 451 aaPredicted RBP12.22□□□□□ -0.45
SDC1-202ENST00000381150 HNF4GQ14541 408 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 RSPO4Q2I0M5 234 aaPredicted RBP12.22□□□□□ -0.45
SDC1-202ENST00000381150 TGIF2LXQ8IUE1 241 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 SGPP2Q8IWX5 399 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 TMEM217Q8N7C4 229 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 GPX7Q96SL4 187 aaPredicted RBP12.22□□□□□ -0.45
SDC1-202ENST00000381150 ZNF2Q9BSG1 426 aaPredicted RBP12.22□□□□□ -0.45
SDC1-202ENST00000381150 NPIPA1Q9UND3 350 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 DBX1A6NMT0 343 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 ZNF587BE7ETH6 402 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 SNRPCP09234 159 aaKnown RBP12.22□□□□□ -0.45
SDC1-202ENST00000381150 DDTP30046 118 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 OPRM1P35372 400 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 ISXQ2M1V0 245 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 FAHD2BQ6P2I3 314 aaPredicted RBP12.22□□□□□ -0.45
SDC1-202ENST00000381150 BRICD5Q6PL45 260 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 TDHQ8IZJ6 230 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 FAHD2AQ96GK7 314 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 SNX22Q96L94 193 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 RTBDNQ9BSG5 229 aaPredicted RBP12.22□□□□□ -0.45
SDC1-202ENST00000381150 ABHD14AQ9BUJ0 271 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 B3GALT5Q9Y2C3 310 aa12.22□□□□□ -0.45
SDC1-202ENST00000381150 IFITM10A6NMD0 228 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 TAAR5O14804 337 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 NUDT21O43809 227 aaKnown RBP12.21□□□□□ -0.45
SDC1-202ENST00000381150 GP1BBP13224 206 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 PRSS12P56730 875 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 ABCA11PQ4W5N1 156 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 HLA-DQA1Q5Y7H0 255 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 GGNBP1Q5YKI7 109 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 BATF2Q8N1L9 274 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 LIPHQ8WWY8 451 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 MISP3Q96FF7 219 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 SCGB3A2Q96PL1 93 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 OPA3Q9H6K4 179 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 SOHLH2Q9NX45 425 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 VDAC3Q9Y277 283 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 CXCL1P09341 107 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 HOXA5P20719 270 aa12.21□□□□□ -0.45
SDC1-202ENST00000381150 SLC35A1P78382 337 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms