RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 HPSE2Q8WWQ2 592 aa16.3■□□□□ 0.2
GTF3A-201ENST00000381140 OR5P3Q8WZ94 311 aa16.3■□□□□ 0.2
GTF3A-201ENST00000381140 ERGIC1Q969X5 290 aa16.3■□□□□ 0.2
GTF3A-201ENST00000381140 MSI2Q96DH6 328 aaKnown RBP16.3■□□□□ 0.2
GTF3A-201ENST00000381140 NAA50Q9GZZ1 169 aaKnown RBP16.3■□□□□ 0.2
GTF3A-201ENST00000381140 ZNF665Q9H7R5 613 aa16.3■□□□□ 0.2
GTF3A-201ENST00000381140 GPR173Q9NS66 373 aa16.3■□□□□ 0.2
GTF3A-201ENST00000381140 RNF7Q9UBF6 113 aa16.3■□□□□ 0.2
GTF3A-201ENST00000381140 PCDHB10Q9UN67 800 aa16.3■□□□□ 0.2
GTF3A-201ENST00000381140 HIVEP2P31629 2446 aa16.3■□□□□ 0.2
GTF3A-201ENST00000381140 FAM157AC9JC47 383 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 OGG1O15527 345 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 NRASP01111 189 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 CD1AP06126 327 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 CCL1P22362 96 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 CD80P33681 288 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 LMO4P61968 165 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 ZNF154Q13106 437 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 ALKBH1Q13686 389 aaKnown RBP16.29■□□□□ 0.2
GTF3A-201ENST00000381140 ZNF181Q2M3W8 571 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 TIMM50Q3ZCQ8 353 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 ZBTB37Q5TC79 503 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 LIPKQ5VXJ0 399 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 FDX2Q6P4F2 183 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 ZNF676Q8N7Q3 588 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 DEFB108BQ8NET1 73 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 Q8TCH9 128 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 RAB39BQ96DA2 213 aa16.29■□□□□ 0.2
GTF3A-201ENST00000381140 FGF23Q9GZV9 251 aaPredicted RBP16.29■□□□□ 0.2
GTF3A-201ENST00000381140 METTL17Q9H7H0 456 aaPredicted RBP16.29■□□□□ 0.2
GTF3A-201ENST00000381140 SF3B6Q9Y3B4 125 aaKnown RBP16.29■□□□□ 0.2
GTF3A-201ENST00000381140 SONP18583 2426 aaKnown RBP16.28■□□□□ 0.2
GTF3A-201ENST00000381140 PPIAL4EA0A075B759 164 aa16.28■□□□□ 0.2
GTF3A-201ENST00000381140 ZNF732B4DXR9 585 aa16.28■□□□□ 0.2
GTF3A-201ENST00000381140 PPIAL4DF5H284 164 aa16.28■□□□□ 0.2
GTF3A-201ENST00000381140 PLPP2O43688 288 aa16.28■□□□□ 0.2
GTF3A-201ENST00000381140 PTBP3O95758 552 aaKnown RBP16.28■□□□□ 0.2
GTF3A-201ENST00000381140 TGFAP01135 160 aa16.28■□□□□ 0.2
GTF3A-201ENST00000381140 PPIAL4FP0DN26 164 aa16.28■□□□□ 0.2
GTF3A-201ENST00000381140 GABRA5P31644 462 aa16.28■□□□□ 0.2
GTF3A-201ENST00000381140 MDH2P40926 338 aaKnown RBP16.28■□□□□ 0.2
GTF3A-201ENST00000381140 CDK5R1Q15078 307 aa16.28■□□□□ 0.2
GTF3A-201ENST00000381140 CLVS2Q5SYC1 327 aa16.28■□□□□ 0.2
GTF3A-201ENST00000381140 TMEM244Q5VVB8 128 aa16.28■□□□□ 0.2
GTF3A-201ENST00000381140 DMKNQ6E0U4 476 aaPredicted RBP16.28■□□□□ 0.2
GTF3A-201ENST00000381140 RPL22L1Q6P5R6 122 aaKnown RBP16.28■□□□□ 0.2
GTF3A-201ENST00000381140 RPL3LQ92901 407 aaKnown RBP16.28■□□□□ 0.2
GTF3A-201ENST00000381140 ITFG2Q969R8 447 aa16.28■□□□□ 0.2
GTF3A-201ENST00000381140 PPIAL4AQ9Y536 164 aa16.28■□□□□ 0.2
GTF3A-201ENST00000381140 SIRT4Q9Y6E7 314 aaPredicted RBP16.28■□□□□ 0.2
GTF3A-201ENST00000381140 WNK2Q9Y3S1 2297 aa16.28■□□□□ 0.2
GTF3A-201ENST00000381140 OR4C45A6NMZ5 311 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 H3BMQ9 156 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 CDIPTO14735 213 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 IGHV2-5P01817 119 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 CELP19835 753 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 GADD45AP24522 165 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 GTF2A1P52655 376 aaPredicted RBP16.27■□□□□ 0.2
GTF3A-201ENST00000381140 GMFBP60983 142 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 CTF1Q16619 201 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 CEACAM21Q3KPI0 293 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 SFRP4Q6FHJ7 346 aaPredicted RBP16.27■□□□□ 0.2
GTF3A-201ENST00000381140 GDPGP1Q6ZNW5 385 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 LRRC28Q86X40 367 aaPredicted RBP16.27■□□□□ 0.2
GTF3A-201ENST00000381140 SPICQ8N5J4 248 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 ZFP41Q8N8Y5 198 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 LINC01356Q8N9X3 169 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 OR10AC1Q8NH08 325 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 NPRL2Q8WTW4 380 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 LRRC29Q8WV35 223 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 C12orf43Q96C57 262 aaKnown RBP16.27■□□□□ 0.2
GTF3A-201ENST00000381140 SMIM19Q96E16 107 aa16.27■□□□□ 0.2
GTF3A-201ENST00000381140 TMEM210A6NLX4 147 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 A8MV72 311 aaPredicted RBP16.26■□□□□ 0.19
GTF3A-201ENST00000381140 INAFM1C9JVW0 142 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 C3orf80F5H4A9 247 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 AIREO43918 545 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 PSMA1P25786 263 aaKnown RBP16.26■□□□□ 0.19
GTF3A-201ENST00000381140 CCR9P51686 369 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 GNG3P63215 75 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 FAM166AQ6J272 317 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 CD200R1LQ6Q8B3 271 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 C11orf53Q8IXP5 236 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 MUC20Q8N307 709 aaPredicted RBP16.26■□□□□ 0.19
GTF3A-201ENST00000381140 OR13C3Q8NGS6 347 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 TRMT10AQ8TBZ6 339 aaKnown RBP16.26■□□□□ 0.19
GTF3A-201ENST00000381140 COMMD4Q9H0A8 199 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 HHLA2Q9UM44 414 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 STUB1Q9UNE7 303 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 TRBV2A0A0J9YWF9 115 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 PNMA8CA0A1B0GUJ8 204 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 ANKRD61A6NGH8 418 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 OR5B21A6NL26 309 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 DHRS7CA6NNS2 312 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 B4DSR2 109 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 ZNF12P17014 697 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 ZNF20P17024 532 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 EGR1P18146 543 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 GALP22466 123 aa16.26■□□□□ 0.19
GTF3A-201ENST00000381140 RPS25P62851 125 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms