RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CLDN15P56746 228 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 FCN2Q15485 313 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 SCGB2B2Q4G0G5 96 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 PEAR1Q5VY43 1037 aaPredicted RBP9.51□□□□□ -0.89
NEDD9-201ENST00000379433 UNQ9370/PRO34162Q6UXP9 181 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 RBMS3Q6XE24 437 aaKnown RBP9.51□□□□□ -0.89
NEDD9-201ENST00000379433 STXBP6Q8NFX7 210 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 OR6X1Q8NH79 312 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 OR10D3Q8NH80 312 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 M1APQ8TC57 530 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 PGAM5Q96HS1 289 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 ST6GAL2Q96JF0 529 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 PIGQQ9BRB3 760 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 MED28Q9H204 178 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 DPAGT1Q9H3H5 408 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 MGAT4CQ9UBM8 478 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 STEAP1Q9UHE8 339 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 CSAG2Q9Y5P2 127 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 ADGRG4Q8IZF6 3080 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 M0QYG6 137 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 ADAM20O43506 726 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 GTF2F2P13984 249 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 ANXA7P20073 488 aaKnown RBP9.51□□□□□ -0.89
NEDD9-201ENST00000379433 HTR2CP28335 458 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 NTF4P34130 210 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 CX3CR1P49238 355 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 PITPNAQ00169 270 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 FGL1Q08830 312 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 RBMS2Q15434 407 aaKnown RBP9.51□□□□□ -0.89
NEDD9-201ENST00000379433 TMED4Q7Z7H5 227 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 GTPBP8Q8N3Z3 284 aaPredicted RBP9.51□□□□□ -0.89
NEDD9-201ENST00000379433 OR56B4Q8NH76 319 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 ANGPTL4Q9BY76 406 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 ZNF430Q9H8G1 570 aaPredicted RBP9.51□□□□□ -0.89
NEDD9-201ENST00000379433 GSKIPQ9P0R6 139 aa9.51□□□□□ -0.89
NEDD9-201ENST00000379433 SPTAN1Q13813 2472 aaKnown RBP9.5□□□□□ -0.89
NEDD9-201ENST00000379433 PLSCR5A0PG75 271 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 AQP7P3A6NL99 342 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 E9PLN8 166 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 RHBDL1O75783 438 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 SLC22A5O76082 557 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 TTRP02766 147 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 CCL11P51671 97 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 SLC22A6Q4U2R8 563 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 CD163Q86VB7 1156 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 CLEC1AQ8NC01 280 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 OR4S1Q8NGB4 309 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 OR9K2Q8NGE7 335 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 HAS2Q92819 552 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 FER1L6-AS2Q96M78 137 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 ATG101Q9BSB4 218 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 G6PC2Q9NQR9 355 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 NDRG3Q9UGV2 375 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 FOXJ3Q9UPW0 622 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 NCOR2Q9Y618 2525 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 CCDC187A0A096LP49 1063 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 IGF2P01344 180 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 CBR1P16152 277 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 COMPP49747 757 aaPredicted RBP9.5□□□□□ -0.89
NEDD9-201ENST00000379433 OR1C1Q15619 314 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 GLT8D1Q68CQ7 371 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 BIVMQ86UB2 503 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 FAM89BQ8N5H3 189 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 FADS6Q8N9I5 356 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 OR1M1Q8NGA1 313 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 OR52B4Q8NGK2 314 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 VPS25Q9BRG1 176 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 VCX2Q9H322 139 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 GSX1Q9H4S2 264 aaPredicted RBP9.5□□□□□ -0.89
NEDD9-201ENST00000379433 TMEM138Q9NPI0 162 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 HDGFL3Q9Y3E1 203 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 NCKAP5O14513 1909 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 ATRXP46100 2492 aa9.5□□□□□ -0.89
NEDD9-201ENST00000379433 TRBV5-5A0A0J9YX44 114 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 SOX15O60248 233 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 CRYABP02511 175 aaKnown RBP9.49□□□□□ -0.89
NEDD9-201ENST00000379433 CTXN2P0C2S0 81 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 CXCL3P19876 107 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 ALDH3B1P43353 468 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 PTH2RP49190 550 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 RBP2P50120 134 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 FGF8P55075 233 aaPredicted RBP9.49□□□□□ -0.89
NEDD9-201ENST00000379433 Q5BKY6 102 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 DCAF10Q5QP82 559 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 AWAT2Q6E213 333 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 LPCAT3Q6P1A2 487 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 CREB3L2Q70SY1 520 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 FOXRED2Q8IWF2 684 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 ADPRHL1Q8NDY3 354 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 OR8B12Q8NGG6 310 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 PIGTQ969N2 578 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 ZBTB8AQ96BR9 441 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 TCEAL7Q9BRU2 100 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 UTP23Q9BRU9 249 aaKnown RBP9.49□□□□□ -0.89
NEDD9-201ENST00000379433 MRPL13Q9BYD1 178 aaKnown RBP9.49□□□□□ -0.89
NEDD9-201ENST00000379433 LDAHQ9H6V9 325 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 CNTD2Q9H8S5 307 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 MYOZ1Q9NP98 299 aaPredicted RBP9.49□□□□□ -0.89
NEDD9-201ENST00000379433 EXPH5Q8NEV8 1989 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 IGHV3-64DA0A0J9YX35 117 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms