RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ICAM5Q9UMF0 924 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 OSGIN2Q9Y236 505 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 SSUH2Q9Y2M2 353 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 CABIN1Q9Y6J0 2220 aa7.5□□□□□ -1.21
VPS36-201ENST00000378060 CXCL13O43927 109 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 CD1AP06126 327 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 GRPP07492 148 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 PTGFRP43088 359 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 SELENOPP49908 381 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 COL19A1Q14993 1142 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 PHYHD1Q5SRE7 291 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 NCR3LG1Q68D85 454 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 JMJD6Q6NYC1 403 aaPredicted RBP7.49□□□□□ -1.21
VPS36-201ENST00000378060 ETFBKMTQ8IXQ9 262 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 CISD2Q8N5K1 135 aaKnown RBP7.49□□□□□ -1.21
VPS36-201ENST00000378060 BVESQ8NE79 360 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 TSPAN32Q96QS1 320 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 DYNLRB1Q9NP97 96 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 RYDENQ9NUL5 291 aaKnown RBP7.49□□□□□ -1.21
VPS36-201ENST00000378060 FAM221AA4D161 298 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 NXPH3O95157 252 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 LY86O95711 162 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 CALCRP30988 508 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 DRD3P35462 400 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 EDDM3BP56851 147 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 KLF9Q13886 244 aaPredicted RBP7.49□□□□□ -1.21
VPS36-201ENST00000378060 OR8G1Q15617 311 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 LPAL2Q16609 132 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 LGALSLQ3ZCW2 172 aaPredicted RBP7.49□□□□□ -1.21
VPS36-201ENST00000378060 TIGITQ495A1 244 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 OTPQ5XKR4 325 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 NHLRC1Q6VVB1 395 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 LINC00696Q6ZRV3 163 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 UBE3DQ7Z6J8 389 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 ABI3BPQ7Z7G0 1075 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 NPEPL1Q8NDH3 523 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 GPBAR1Q8TDU6 330 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 TMPRSS13Q9BYE2 586 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 ALX4Q9H161 411 aaPredicted RBP7.49□□□□□ -1.21
VPS36-201ENST00000378060 SLC35B3Q9H1N7 401 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 PSENENQ9NZ42 101 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 OR4C45A6NMZ5 311 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 LINC01387J3KSC0 135 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 TERTO14746 1132 aaKnown RBP7.49□□□□□ -1.21
VPS36-201ENST00000378060 HPXP02790 462 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 IL3RAP26951 378 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 SUB1P53999 127 aaKnown RBP eCLIP7.49□□□□□ -1.21
VPS36-201ENST00000378060 TAS2R45P59539 299 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 MIDNQ504T8 468 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 OR52N4Q8NGI2 321 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 OR4F5Q8NH21 305 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 ARHGAP5-AS1Q96IT6 56 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 OR4F4Q96R69 305 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 DUSP13Q9UII6 198 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 RCL1Q9Y2P8 373 aaKnown RBP7.49□□□□□ -1.21
VPS36-201ENST00000378060 LSM2Q9Y333 95 aaKnown RBP7.49□□□□□ -1.21
VPS36-201ENST00000378060 MRPS2Q9Y399 296 aaKnown RBP7.49□□□□□ -1.21
VPS36-201ENST00000378060 TMEM218A2RU14 115 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 METTL12A8MUP2 240 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 DHRS3O75911 302 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 RAB13P51153 203 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 MYBPHQ13203 477 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 RAB32Q13637 225 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 IL13RA2Q14627 380 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 INPP5JQ15735 1006 aaPredicted RBP7.49□□□□□ -1.21
VPS36-201ENST00000378060 FAM162BQ5T6X4 162 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 OR2T2Q6IF00 324 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 PTCRAQ6ISU1 281 aaPredicted RBP7.49□□□□□ -1.21
VPS36-201ENST00000378060 TMPRSS7Q7RTY8 843 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 FBXL14Q8N1E6 418 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 ZNF687Q8N1G0 1237 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 OR11H7Q8NGC8 314 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 OR13D1Q8NGV5 346 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 EDARADDQ8WWZ3 215 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 RPUSD4Q96CM3 377 aaKnown RBP7.49□□□□□ -1.21
VPS36-201ENST00000378060 MAGT1Q9H0U3 335 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 TMPRSS5Q9H3S3 457 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 LANCL2Q9NS86 450 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 SERGEFQ9UGK8 458 aa7.49□□□□□ -1.21
VPS36-201ENST00000378060 ELF5Q9UKW6 265 aaPredicted RBP7.49□□□□□ -1.21
VPS36-201ENST00000378060 IGHV3-9P01782 118 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 SPP1P10451 314 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 NME1P15531 152 aaKnown RBP7.48□□□□□ -1.21
VPS36-201ENST00000378060 DSCR4P56555 118 aaPredicted RBP7.48□□□□□ -1.21
VPS36-201ENST00000378060 ZNF574Q6ZN55 896 aaPredicted RBP7.48□□□□□ -1.21
VPS36-201ENST00000378060 FAM58AQ8N1B3 248 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 OR1F12Q8NHA8 337 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 LHFPL5Q8TAF8 219 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 GPR119Q8TDV5 335 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 C8orf44Q96CB5 159 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 MRPS24Q96EL2 167 aaKnown RBP7.48□□□□□ -1.21
VPS36-201ENST00000378060 PHF7Q9BWX1 381 aaPredicted RBP7.48□□□□□ -1.21
VPS36-201ENST00000378060 KLF13Q9Y2Y9 288 aaPredicted RBP7.48□□□□□ -1.21
VPS36-201ENST00000378060 WSB1Q9Y6I7 421 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 OR2W5A6NFC9 320 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 CYTIPO60759 359 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 APOA2P02652 100 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 CRHP06850 196 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 SRFP11831 508 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 CTLA4P16410 223 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms