RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 PTGER4P35408 488 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 GNALP38405 381 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 SCGB2B2Q4G0G5 96 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 TMEM128Q5BJH2 165 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 RPUSD3Q6P087 351 aaKnown RBP8.34□□□□□ -1.07
TRIM39-202ENST00000376659 BEND4Q6ZU67 534 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 ACOT7LQ6ZUV0 252 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 TMEM105Q8N8V8 129 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 CCDC54Q8NEL0 328 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 GJC3Q8NFK1 279 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 OR5AP2Q8NGF4 316 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 OR2AJ1Q8NGZ0 328 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 FAM71F1Q96KD3 344 aaPredicted RBP8.34□□□□□ -1.07
TRIM39-202ENST00000376659 MS4A7Q9GZW8 240 aaPredicted RBP8.34□□□□□ -1.07
TRIM39-202ENST00000376659 C11orf1Q9H5F2 150 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 ZNF160Q9HCG1 818 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 TMEM38BQ9NVV0 291 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 GPN3Q9UHW5 284 aaPredicted RBP8.34□□□□□ -1.07
TRIM39-202ENST00000376659 TINAGQ9UJW2 476 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 SMG1Q96Q15 3661 aaKnown RBP8.34□□□□□ -1.07
TRIM39-202ENST00000376659 FAM157AC9JC47 383 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 EDN3P14138 238 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 CSNK1A1P48729 337 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 PRKXP51817 358 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 RAB35Q15286 201 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 OR8B8Q15620 311 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 ATRAIDQ6UW56 229 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 RELL2Q8NC24 303 aaPredicted RBP8.34□□□□□ -1.07
TRIM39-202ENST00000376659 OR56B1Q8NGI3 324 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 NKD1Q969G9 470 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 TMEM45BQ96B21 275 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 OR10C1Q96KK4 312 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 VRK1Q99986 396 aaPredicted RBP8.34□□□□□ -1.07
TRIM39-202ENST00000376659 WNT5BQ9H1J7 359 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 SEC61A2Q9H9S3 476 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 RAB18Q9NP72 206 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 RDH8Q9NYR8 311 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 IGKV3D-15A0A087WSY6 115 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 CCDC187A0A096LP49 1063 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 LGALS8O00214 317 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 CBR3O75828 277 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 C4BPBP20851 252 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 AGTR1P30556 359 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 RAC3P60763 192 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 LIN54Q6MZP7 749 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 Q7L0L9 218 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 PNLDC1Q8NA58 520 aaKnown RBP8.34□□□□□ -1.07
TRIM39-202ENST00000376659 EMG1Q92979 244 aaKnown RBP8.34□□□□□ -1.07
TRIM39-202ENST00000376659 AQP10Q96PS8 301 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 PIGQQ9BRB3 760 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 OR10A2Q9H208 303 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 ACKR4Q9NPB9 350 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 PRR13Q9NZ81 148 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 CRIM1Q9NZV1 1036 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 PRELID3BQ9Y3B1 194 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 PTRH2Q9Y3E5 179 aaKnown RBP8.34□□□□□ -1.07
TRIM39-202ENST00000376659 PTPRBP23467 1997 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 SFTPCP11686 197 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 SURF2Q15527 256 aaPredicted RBP8.33□□□□□ -1.08
TRIM39-202ENST00000376659 FAM74A1Q5RGS3 127 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 COQ8AQ8NI60 647 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 MARS2Q96GW9 593 aaKnown RBP8.33□□□□□ -1.08
TRIM39-202ENST00000376659 SLC6A15Q9H2J7 730 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 OR5AC2Q9NZP5 309 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 MBD2Q9UBB5 411 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 HSF4Q9ULV5 492 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 ZNF503-AS2A6NEH8 195 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 DNASE2O00115 360 aaPredicted RBP8.33□□□□□ -1.08
TRIM39-202ENST00000376659 CYTIPO60759 359 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 SPDEFO95238 335 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 WDPCPO95876 746 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 H2AFB1P0C5Y9 115 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 NAAAQ02083 359 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 RELQ04864 619 aaPredicted RBP8.33□□□□□ -1.08
TRIM39-202ENST00000376659 PPA1Q15181 289 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 DRAM2Q6UX65 266 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 PXT1Q8NFP0 134 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 ADAMTS17Q8TE56 1095 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 PHB2Q99623 299 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 SLC5A7Q9GZV3 580 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 TUBD1Q9UJT1 453 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 G3V3Y1 287 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 M0R135 149 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 MPIG6BO95866 241 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 SERPINF1P36955 418 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 TAS2R31P59538 309 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 RPS18P62269 152 aaKnown RBP8.33□□□□□ -1.08
TRIM39-202ENST00000376659 DMRTC1Q5HYR2 192 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 CPT1CQ8TCG5 803 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 ZNF799Q96GE5 643 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 CABIN1Q9Y6J0 2220 aa8.33□□□□□ -1.08
TRIM39-202ENST00000376659 SERPINE3A8MV23 424 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 KRBOX1C9JBD0 128 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 ZNF587BE7ETH6 402 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 CSN2P05814 226 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 CHATP28329 748 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 LUMP51884 338 aaPredicted RBP8.32□□□□□ -1.08
TRIM39-202ENST00000376659 IL13RA1P78552 427 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 ZXDAP98168 799 aa8.32□□□□□ -1.08
TRIM39-202ENST00000376659 GFOD2Q3B7J2 385 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms