RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 HAND1O96004 215 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 VIPP01282 170 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 KLK1P06870 262 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 CRHBPP24387 322 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 CHATP28329 748 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 OR12D2P58182 307 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 NTHL1P78549 312 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 CCL14Q16627 93 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 UPP1Q16831 310 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 ACTL10Q5JWF8 245 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 SPANXN3Q5MJ09 141 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 FCRL6Q6DN72 434 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 ZNF66Q6ZN08 573 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 Q6ZSR9 355 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 LARP4Q71RC2 724 aaKnown RBP eCLIP6.96□□□□□ -1.35e-6■■■■■ 28.1
USP48-203ENST00000374732 GBGT1Q8N5D6 347 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 POC1AQ8NBT0 407 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 OR2A12Q8NGT7 310 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 ISL2Q96A47 359 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 RPEQ96AT9 228 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 LGALS12Q96DT0 336 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 SMIM19Q96E16 107 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 S100A13Q99584 98 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 COPS8Q99627 209 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 OR11A1Q9GZK7 315 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 ZBP1Q9H171 429 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 RHOJQ9H4E5 214 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 TRAPPC4Q9Y296 219 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 PATJQ8NI35 1801 aa6.96□□□□□ -1.3
USP48-203ENST00000374732 MGMTP16455 207 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 TCN2P20062 427 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 REG1BP48304 166 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 PPM1JQ5JR12 505 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 NIPAL3Q6P499 406 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 UNQ5815/PRO19632Q6UWF5 114 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 FAM159AQ6UWV7 190 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 SERPINA11Q86U17 422 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 MDGA1Q8NFP4 955 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 OR9I1Q8NGQ6 314 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 OR5W2Q8NH69 310 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 TIMD4Q96H15 378 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 SLC25A51Q9H1U9 297 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 MAP1LC3AQ9H492 121 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 CD320Q9NPF0 282 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 MED29Q9NX70 200 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 DOCK3Q8IZD9 2030 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 ARL5CA6NH57 179 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 ZNF724A8MTY0 619 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 M0QZQ0 153 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 CLDN5O00501 218 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 CLDN1O95832 211 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 CELA2BP08218 269 aaPredicted RBP6.95□□□□□ -1.3
USP48-203ENST00000374732 PGA3P0DJD8 388 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 CYBAP13498 195 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 HRH1P35367 487 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 FOXA1P55317 472 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 SIRPAP78324 504 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 PPP1R1AQ13522 171 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 OR2W3Q7Z3T1 314 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 C1QL4Q86Z23 238 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 DEFB107AQ8IZN7 70 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 FER1L6-AS1Q8NA97 138 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 SLC16A11Q8NCK7 471 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 PCED1BQ96HM7 432 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 MBOAT4Q96T53 435 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 PAAF1Q9BRP4 392 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 MRPL16Q9NX20 251 aaKnown RBP6.95□□□□□ -1.3
USP48-203ENST00000374732 SLC25A37Q9NYZ2 338 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 XRCC3O43542 346 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 MALP21145 153 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 OR8B8Q15620 311 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 RPL22L1Q6P5R6 122 aaKnown RBP6.95□□□□□ -1.3
USP48-203ENST00000374732 BHLHA9Q7RTU4 235 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 ZNF547Q8IVP9 402 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 DND1Q8IYX4 353 aaKnown RBP6.95□□□□□ -1.3
USP48-203ENST00000374732 C5orf17Q8NAS9 161 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 MIEN1Q9BRT3 115 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 DERL1Q9BUN8 251 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 C19orf24Q9BVV8 132 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 OR51I1Q9H343 314 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 NLKQ9UBE8 527 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 ENPP4Q9Y6X5 453 aa6.95□□□□□ -1.3
USP48-203ENST00000374732 FNDC1Q4ZHG4 1894 aaPredicted RBP6.94□□□□□ -1.3
USP48-203ENST00000374732 MYBPHLA2RUH7 354 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 FAM183AA6NL82 134 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 HCRTR1O43613 425 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 GCGP01275 180 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 IGLV3-25P01717 112 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 HGFP14210 728 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 HOXD9P28356 352 aaPredicted RBP6.94□□□□□ -1.3
USP48-203ENST00000374732 CD1CP29017 333 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 GP2P55259 537 aaKnown RBP6.94□□□□□ -1.3
USP48-203ENST00000374732 CDH18Q13634 790 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 TMEM241Q24JQ0 296 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 TDRG1Q3Y452 100 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 GLT8D1Q68CQ7 371 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 TRMT10BQ6PF06 316 aaKnown RBP6.94□□□□□ -1.3
USP48-203ENST00000374732 PLXDC2Q6UX71 529 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 GTF2H5Q6ZYL4 71 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 H2BFWTQ7Z2G1 175 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms