RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 NEURL1O76050 574 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 NAT2P11245 290 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 CRYGSP22914 178 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 VAMP1P23763 118 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 BLVRBP30043 206 aaPredicted RBP10.54□□□□□ -0.72
HMGCL-202ENST00000374487 ALDH3B1P43353 468 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 CBX5P45973 191 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 MTCP1P56278 107 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 RIPPLY1Q0D2K3 151 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 ACTBL2Q562R1 376 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 ESCO2Q56NI9 601 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 RIPPLY2Q5TAB7 128 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.54□□□□□ -0.72
HMGCL-202ENST00000374487 LYG2Q86SG7 212 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 OR10K1Q8NGX5 313 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 AKR7LQ8NHP1 331 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 SIGLEC12Q96PQ1 595 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 ARL6Q9H0F7 186 aa10.54□□□□□ -0.72
HMGCL-202ENST00000374487 NCOA6Q14686 2063 aaPredicted RBP10.54□□□□□ -0.72
HMGCL-202ENST00000374487 LINC00862A6NCI5 91 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 LEUTXA8MZ59 168 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 MFNGO00587 321 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 ATXN7O15265 892 aaPredicted RBP10.53□□□□□ -0.72
HMGCL-202ENST00000374487 RAD51DO75771 328 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 TMEM225BP0DP42 221 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 FGL1Q08830 312 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 PPP1R1AQ13522 171 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 GK2Q14410 553 aaPredicted RBP10.53□□□□□ -0.72
HMGCL-202ENST00000374487 MICBQ29980 383 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 DCAF10Q5QP82 559 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 LPCAT3Q6P1A2 487 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 LINC00696Q6ZRV3 163 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 TMUB2Q71RG4 321 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 FAM89BQ8N5H3 189 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 TERB2Q8NHR7 220 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 MRGPRFQ96AM1 343 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 PHB2Q99623 299 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 OCSTAMPQ9BR26 566 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 ST6GALNAC5Q9BVH7 336 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 GPR35Q9HC97 309 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 GPR173Q9NS66 373 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 NOSIPQ9Y314 301 aaKnown RBP10.53□□□□□ -0.72
HMGCL-202ENST00000374487 C9orf170A2RU37 121 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 MRPL33O75394 65 aaKnown RBP10.53□□□□□ -0.72
HMGCL-202ENST00000374487 RP2O75695 350 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 FARS2O95363 451 aaKnown RBP10.53□□□□□ -0.72
HMGCL-202ENST00000374487 IGHV3-9P01782 118 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 PPP3CBP16298 524 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 AMY2BP19961 511 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 OR3A2P47893 321 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 PSG4Q00888 419 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 OR1C1Q15619 314 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 CLLU1Q5K131 121 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 LY6G6FQ5SQ64 297 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 FAHD2BQ6P2I3 314 aaPredicted RBP10.53□□□□□ -0.72
HMGCL-202ENST00000374487 Q6ZSR3 168 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 FDCSPQ8NFU4 85 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 OR5M8Q8NGP6 311 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 OR5H2Q8NGV7 314 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 MARCH1Q8TCQ1 289 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 PCNPQ8WW12 178 aaKnown RBP10.53□□□□□ -0.72
HMGCL-202ENST00000374487 CPNE2Q96FN4 548 aaPredicted RBP10.53□□□□□ -0.72
HMGCL-202ENST00000374487 FAHD2AQ96GK7 314 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 GSX2Q9BZM3 304 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 COMMD9Q9P000 198 aa10.53□□□□□ -0.72
HMGCL-202ENST00000374487 FAM230AA0A1W2PPH8 454 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 OR6C6A6NF89 314 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 DHRS7CA6NNS2 312 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 NAT1P18440 290 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 CPT2P23786 658 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 ZBTB25P24278 435 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 AP2S1P53680 142 aaPredicted RBP10.52□□□□□ -0.72
HMGCL-202ENST00000374487 IKZF1Q13422 519 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 HLXQ14774 488 aaPredicted RBP10.52□□□□□ -0.72
HMGCL-202ENST00000374487 SULF2Q8IWU5 870 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 ARRDC1Q8N5I2 433 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 ADAD2Q8NCV1 583 aaKnown RBP10.52□□□□□ -0.72
HMGCL-202ENST00000374487 CASTOR1Q8WTX7 329 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 FBXW5Q969U6 566 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 SPSB1Q96BD6 273 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 HES7Q9BYE0 225 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 OR2H1Q9GZK4 316 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 MFFQ9GZY8 342 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 ZNF703Q9H7S9 590 aaPredicted RBP10.52□□□□□ -0.72
HMGCL-202ENST00000374487 PLA2G3Q9NZ20 509 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 ZNF230Q9UIE0 474 aaPredicted RBP10.52□□□□□ -0.72
HMGCL-202ENST00000374487 TP53TG5Q9Y2B4 290 aa10.52□□□□□ -0.72
HMGCL-202ENST00000374487 TNRC6AQ8NDV7 1962 aaKnown RBP10.52□□□□□ -0.73
HMGCL-202ENST00000374487 OR5H14A6NHG9 310 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 RFPL4AA6NLU0 287 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 FAM166BA8MTA8 275 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 FAM25EA8MYX2 175 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 RFPL4AL1F8VTS6 287 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 CSTBP04080 98 aaKnown RBP10.52□□□□□ -0.73
HMGCL-202ENST00000374487 CELA3AP09093 270 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 ACKR3P25106 362 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 AGTR1P30556 359 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 PLGLB1Q02325 96 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 HGFACQ04756 655 aa10.52□□□□□ -0.73
HMGCL-202ENST00000374487 AIMP2Q13155 320 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms