RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 SAP30O75446 220 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 TIPRLO75663 272 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 BRI3O95415 125 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 IFNA6P05013 189 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 GPX2P18283 190 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 GLRA1P23415 457 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 OTX1P32242 354 aaPredicted RBP9.48□□□□□ -0.89
HDAC8-204ENST00000373560 GNALP38405 381 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 CDKN2AP42771 156 aaKnown RBP9.48□□□□□ -0.89
HDAC8-204ENST00000373560 GPR4P46093 362 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 POU3F4P49335 361 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 INSL3P51460 131 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 FAM3AP98173 230 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 NFYCQ13952 458 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 AGBL2Q5U5Z8 902 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 SLC16A9Q7RTY1 509 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 THAP5Q7Z6K1 395 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 OAFQ86UD1 273 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 NRMQ8IXM6 262 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 STPG2Q8N412 459 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 OR11H1Q8NG94 326 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 HPSE2Q8WWQ2 592 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 ST6GALNAC6Q969X2 333 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 RHOVQ96L33 236 aa9.48□□□□□ -0.89
HDAC8-204ENST00000373560 PAPOLGQ9BWT3 736 aaKnown RBP9.48□□□□□ -0.89
HDAC8-204ENST00000373560 SDR39U1Q9NRG7 319 aaPredicted RBP9.48□□□□□ -0.89
HDAC8-204ENST00000373560 A0A1B0GVY2 172 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 hCG_1809904A0A1W2PP81 198 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 A0A1W2PPE2 198 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 A0A1W2PR64 198 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 A0A1W2PRV1 198 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 A8MZ25 164 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 CCRL2O00421 344 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 SLC22A2O15244 555 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 MMP23AO75900 390 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 IDO1P14902 403 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 CDX1P47902 265 aaPredicted RBP9.47□□□□□ -0.89
HDAC8-204ENST00000373560 SLC1A6P48664 564 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 PRKXP51817 358 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 PMS2P11Q13670 270 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 RNLSQ5VYX0 342 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 LCN8Q6JVE9 175 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 ZNF429Q86V71 674 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 DRAM1Q8N682 238 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 C4orf3Q8WVX3 66 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 DCUN1D4Q92564 292 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 SPSB4Q96A44 273 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 ZNF488Q96MN9 340 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 NMNAT1Q9HAN9 279 aaPredicted RBP9.47□□□□□ -0.89
HDAC8-204ENST00000373560 CYB5R1Q9UHQ9 305 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 SH3GLB1Q9Y371 365 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 MOB4Q9Y3A3 225 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 HSPE1-MOB4S4R3N1 261 aa9.47□□□□□ -0.89
HDAC8-204ENST00000373560 hCG_38984A0A1B0GV85 526 aa9.46□□□□□ -0.9
HDAC8-204ENST00000373560 A0A1W2PPH5 198 aa9.46□□□□□ -0.9
HDAC8-204ENST00000373560 RFPL4AA6NLU0 287 aa9.46□□□□□ -0.9
HDAC8-204ENST00000373560 EFCAB9A8MZ26 197 aa9.46□□□□□ -0.9
HDAC8-204ENST00000373560 RFPL4AL1F8VTS6 287 aa9.46□□□□□ -0.9
HDAC8-204ENST00000373560 AHCYL1O43865 530 aa9.46□□□□□ -0.9
HDAC8-204ENST00000373560 MTRF1O75570 445 aaKnown RBP9.46□□□□□ -0.9
HDAC8-204ENST00000373560 OR1E2P47887 323 aa9.46□□□□□ -0.9
HDAC8-204ENST00000373560 CATSPERDQ86XM0 798 aa9.46□□□□□ -0.9
HDAC8-204ENST00000373560 BATF2Q8N1L9 274 aa9.46□□□□□ -0.9
HDAC8-204ENST00000373560 C5orf56Q8N8D9 126 aa9.46□□□□□ -0.9
HDAC8-204ENST00000373560 UBLCP1Q8WVY7 318 aaPredicted RBP9.46□□□□□ -0.9
HDAC8-204ENST00000373560 STMN2Q93045 179 aa9.46□□□□□ -0.9
HDAC8-204ENST00000373560 HIPK2Q9H2X6 1198 aa9.46□□□□□ -0.9
HDAC8-204ENST00000373560 FN3KQ9H479 309 aa9.46□□□□□ -0.9
HDAC8-204ENST00000373560 MRPL22Q9NWU5 206 aaKnown RBP9.46□□□□□ -0.9
HDAC8-204ENST00000373560 A4GNTQ9UNA3 340 aa9.46□□□□□ -0.9
HDAC8-204ENST00000373560 FAM172BPA6NC97 362 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 ZNF728P0DKX0 622 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 FXYD6P3P58550 94 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 VSNL1P62760 191 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 GNB1P62873 340 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 SLC35B1P78383 322 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 PRDX4Q13162 271 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 KCTD8Q6ZWB6 473 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 CPLX4Q7Z7G2 160 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 FUNDC1Q8IVP5 155 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 COMMD1Q8N668 190 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 CYB561A3Q8NBI2 242 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 C11orf65Q8NCR3 313 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.45□□□□□ -0.96e-6■■■■■ 28.1
HDAC8-204ENST00000373560 OR52B2Q96RD2 323 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 C1orf21Q9H246 121 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 GNB4Q9HAV0 340 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 RHCGQ9UBD6 479 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.45□□□□□ -0.9
HDAC8-204ENST00000373560 B9D1Q9UPM9 204 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 GMEB1Q9Y692 573 aa9.45□□□□□ -0.9
HDAC8-204ENST00000373560 V9GYY5 206 aaPredicted RBP9.45□□□□□ -0.9
HDAC8-204ENST00000373560 TLDC2A0PJX2 215 aa9.44□□□□□ -0.9
HDAC8-204ENST00000373560 ZNF850A8MQ14 1090 aa9.44□□□□□ -0.9
HDAC8-204ENST00000373560 TBX1O43435 398 aa9.44□□□□□ -0.9
HDAC8-204ENST00000373560 PTP4A3O75365 173 aa9.44□□□□□ -0.9
HDAC8-204ENST00000373560 ACKR3P25106 362 aa9.44□□□□□ -0.9
HDAC8-204ENST00000373560 HTR1DP28221 377 aa9.44□□□□□ -0.9
HDAC8-204ENST00000373560 GABPB1Q06547 395 aaPredicted RBP9.44□□□□□ -0.9
HDAC8-204ENST00000373560 UTF1Q5T230 341 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms