RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 CD55P08174 381 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 C5AR1P21730 350 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 CAMLGP49069 296 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 SEC13P55735 322 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 JOSD1Q15040 202 aaPredicted RBP10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 RAB35Q15286 201 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 HSD17B11Q8NBQ5 300 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 DAZLQ92904 295 aaKnown RBP10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 CDCA3Q99618 268 aaPredicted RBP10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 HDHD3Q9BSH5 251 aaPredicted RBP10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 BCO1Q9HAY6 547 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 CRLF2Q9HC73 371 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 KIAA2026Q5HYC2 2103 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 EXPH5Q8NEV8 1989 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 RBFOX3A6NFN3 312 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 SEMA4FO95754 770 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 ZNF93P35789 620 aaPredicted RBP10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 CD200P41217 278 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 DHPSP49366 369 aaPredicted RBP10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 SP6Q3SY56 376 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 SOHLH1Q5JUK2 328 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 OR2T2Q6IF00 324 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 OR10G6Q8NH81 332 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 RNF133Q8WVZ7 376 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 NDUFAF3Q9BU61 184 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 APOOQ9BUR5 198 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 TXNIPQ9H3M7 391 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 C8orf33Q9H7E9 229 aaPredicted RBP10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 LIPGQ9Y5X9 500 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 CHD3Q12873 2000 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 SPENQ96T58 3664 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 PLPP3O14495 311 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 SNU13P55769 128 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 KIR2DS3Q14952 304 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 CDH20Q9HBT6 801 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 MRPS23Q9Y3D9 190 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 MS4A18H0YCH9 400 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 PPP1R2P9O14990 202 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 GSTP1P09211 210 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 TAGLN2P37802 199 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 CSNK1A1P48729 337 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 SGCBQ16585 318 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 MS4A18Q3C1V0 323 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 TSPO2Q5TGU0 170 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 KCTD18Q6PI47 426 aaPredicted RBP10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 LYZL2Q7Z4W2 148 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 SNX22Q96L94 193 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 C5orf34Q96MH7 638 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 CCNL2Q96S94 520 aaPredicted RBP10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 TMEM106CQ9BVX2 250 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 LUZP4Q9P127 313 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 PCDH15Q96QU1 1955 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 ELOA3CA0A087WX78 387 aaPredicted RBP10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 MPIG6BO95866 241 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 CHATP28329 748 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 EIF5AP63241 154 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 ZNHIT3Q15649 155 aaPredicted RBP10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 CST6Q15828 149 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 STX12Q86Y82 276 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 AVL9Q8NBF6 648 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 M1APQ8TC57 530 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 RNASEH2CQ8TDP1 164 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 LURAP1Q96LR2 239 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 SYT3Q9BQG1 590 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 PBOV1Q9GZY1 135 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 UNKLQ9H9P5 680 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 PHPT1Q9NRX4 125 aaPredicted RBP10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 EHFQ9NZC4 300 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 B3GALT5Q9Y2C3 310 aa10.23□□□□□ -0.77
SMARCA1-201ENST00000371121 NSA2O95478 260 aaKnown RBP10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 PNLIPP16233 465 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 ZNF43P17038 809 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 OR5H2Q8NGV7 314 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 FAM213BQ8TBF2 198 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 GPR119Q8TDV5 335 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 METTL21AQ8WXB1 218 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 SLC25A36Q96CQ1 311 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 NXF5Q9H1B4 397 aaKnown RBP10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 CALHM2Q9HA72 323 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 FTCDNL1E5RQL4 147 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 GEMIN2O14893 280 aaKnown RBP10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 CRTAPO75718 401 aaPredicted RBP10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 UTS2O95399 124 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 FOXO1Q12778 655 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 TMEM187Q14656 261 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 LBHQ53QV2 105 aaPredicted RBP10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 FAM90A2PQ658T7 463 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 PRR22Q8IZ63 422 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 D2HGDHQ8N465 521 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 SUMF2Q8NBJ7 301 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 OR51E1Q8TCB6 317 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 C18orf12Q96KH6 178 aa10.22□□□□□ -0.77
SMARCA1-201ENST00000371121 SYT7O43581 403 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 SCGB1D2O95969 90 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 ADH1CP00326 375 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 OR4A8P0C604 315 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 CXCR1P25024 350 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 C21orf62-AS1Q17RA5 79 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 DPPA2Q7Z7J5 298 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 OR2AJ1Q8NGZ0 328 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms