RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ANXA7P20073 488 aaKnown RBP12.93□□□□□ -0.34
LMO4-201ENST00000370542 HTR2AP28223 471 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 ACTBP60709 375 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 ACTG1P63261 375 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 HAGHLQ6PII5 290 aaPredicted RBP12.93□□□□□ -0.34
LMO4-201ENST00000370542 ZNF836Q6ZNA1 936 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.93□□□□□ -0.34
LMO4-201ENST00000370542 OR5J2Q8NH18 312 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 APH1AQ96BI3 265 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 BPIFA2Q96DR5 249 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 SLC25A38Q96DW6 304 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 PELI1Q96FA3 418 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 NARS2Q96I59 477 aaKnown RBP12.93□□□□□ -0.34
LMO4-201ENST00000370542 OR11A1Q9GZK7 315 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 TCF7L1Q9HCS4 588 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 CISD1Q9NZ45 108 aaKnown RBP12.93□□□□□ -0.34
LMO4-201ENST00000370542 COMMD9Q9P000 198 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 CR1P17927 2039 aa12.93□□□□□ -0.34
LMO4-201ENST00000370542 TMED7-TICAM2A0A0A6YYA0 188 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 DISC1C4P0D8 188 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 GOSR2O14653 212 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 SNAPINO95295 136 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 PLATP00750 562 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 IGHV4-39P01824 125 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 THY1P04216 161 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 S100A8P05109 93 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 ITGA5P08648 1049 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 PTAFRP25105 342 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 CDKN1AP38936 164 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 POLR2HP52434 150 aaKnown RBP12.92□□□□□ -0.34
LMO4-201ENST00000370542 RPS11P62280 158 aaKnown RBP eCLIP12.92□□□□□ -0.34
LMO4-201ENST00000370542 SLC17A1Q14916 467 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 OR1Q1Q15612 314 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 GABRA6Q16445 453 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 DHRS7BQ6IAN0 325 aaPredicted RBP12.92□□□□□ -0.34
LMO4-201ENST00000370542 OR7E24Q6IFN5 339 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 C11orf71Q6IPW1 123 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 ALKBH2Q6NS38 261 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 C11orf88Q6PI97 169 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 MEX3DQ86XN8 651 aaKnown RBP12.92□□□□□ -0.34
LMO4-201ENST00000370542 TSNAXQ99598 290 aaKnown RBP12.92□□□□□ -0.34
LMO4-201ENST00000370542 C12orf57Q99622 126 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 TCEAL7Q9BRU2 100 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 MS4A7Q9GZW8 240 aaPredicted RBP12.92□□□□□ -0.34
LMO4-201ENST00000370542 MED20Q9H944 212 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 NOX4Q9NPH5 578 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 TMED7Q9Y3B3 224 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 FLVCR1Q9Y5Y0 555 aa12.92□□□□□ -0.34
LMO4-201ENST00000370542 TMEM72A0PK05 275 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 MCIDASD6RGH6 385 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 MRPL33O75394 65 aaKnown RBP12.91□□□□□ -0.34
LMO4-201ENST00000370542 PVALBP20472 110 aaPredicted RBP12.91□□□□□ -0.34
LMO4-201ENST00000370542 NOS3P29474 1203 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 ACAA2P42765 397 aaKnown RBP12.91□□□□□ -0.34
LMO4-201ENST00000370542 MEOX2P50222 304 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 FOXG1P55316 489 aaPredicted RBP12.91□□□□□ -0.34
LMO4-201ENST00000370542 SLC35A1P78382 337 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 CRMP1Q14194 572 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 PAN3Q58A45 887 aaKnown RBP12.91□□□□□ -0.34
LMO4-201ENST00000370542 GLT8D1Q68CQ7 371 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 C17orf107Q6ZR85 190 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 FAM220AQ7Z4H9 259 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 HMGN2P46Q86SG4 172 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 ZNF546Q86UE3 836 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 ZNF440Q8IYI8 595 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 C12orf45Q8N5I9 185 aaPredicted RBP12.91□□□□□ -0.34
LMO4-201ENST00000370542 WDR31Q8NA23 367 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 C1orf162Q8NEQ5 155 aaPredicted RBP12.91□□□□□ -0.34
LMO4-201ENST00000370542 ZNF417Q8TAU3 575 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 TMEM45BQ96B21 275 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 DDIT4LQ96D03 193 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 TMEM138Q9NPI0 162 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 COA4Q9NYJ1 87 aa12.91□□□□□ -0.34
LMO4-201ENST00000370542 CARHSP1Q9Y2V2 147 aaKnown RBP12.91□□□□□ -0.34
LMO4-201ENST00000370542 CHD3Q12873 2000 aaKnown RBP12.9□□□□□ -0.34
LMO4-201ENST00000370542 A0A096LNT2 108 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 ZC3H12DA2A288 527 aaKnown RBP12.9□□□□□ -0.34
LMO4-201ENST00000370542 E7EQL1 145 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 RNF223E7ERA6 249 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 FRS3O43559 492 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 NDUFS7O75251 213 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 RAD51DO75771 328 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 LYPD3O95274 346 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 IGHV3-9P01782 118 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 MRPL3P09001 348 aaKnown RBP12.9□□□□□ -0.34
LMO4-201ENST00000370542 GKN3PP0CG01 181 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 VSIG10L2P0DP72 767 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 MAKP20794 623 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 CD40P25942 277 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 TACR3P29371 465 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 FXYD6P3P58550 94 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 HFEQ30201 348 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 Q499Y3 187 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 TP53I3Q53FA7 332 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 NKAPLQ5M9Q1 402 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 C10orf91Q5T1B1 145 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 MRPL2Q5T653 305 aaKnown RBP12.9□□□□□ -0.34
LMO4-201ENST00000370542 HES5Q5TA89 166 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 TMEM108Q6UXF1 575 aa12.9□□□□□ -0.34
LMO4-201ENST00000370542 WDR88Q6ZMY6 472 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 322.8 ms