RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 S100A7AQ86SG5 101 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 ZDHHC23Q8IYP9 409 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 KDF1Q8NAX2 398 aaPredicted RBP14.22□□□□□ -0.13
COL17A1-202ENST00000369733 MRGPRX1Q96LB2 322 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 VAMP8Q9BV40 100 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 VN1R1Q9GZP7 353 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 CT45A6P0DMU7 189 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 CT45A5P0DMU8 189 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 CT45A7P0DMV0 189 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 CT45A8P0DMV1 189 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 CT45A9P0DMV2 189 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 ZNF345Q14585 488 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 VAMP3Q15836 100 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 CT45A2Q5DJT8 189 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 ARSJQ5FYB0 599 aaPredicted RBP14.22□□□□□ -0.13
COL17A1-202ENST00000369733 CT45A1Q5HYN5 189 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 PLAC9Q5JTB6 97 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 CT45A3Q8NHU0 189 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 RPS4Y2Q8TD47 263 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 PIK3IP1Q96FE7 263 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 CLCF1Q9UBD9 225 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 POLDIP2Q9Y2S7 368 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 CNTRLQ7Z7A1 2325 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 TRAV8-7A0A075B6U6 113 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 MFSD2BA6NFX1 497 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 GPR37O15354 613 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 MPZL1O95297 269 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 OR5AC1P0C628 307 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 FUT3P21217 361 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 UBE2G1P62253 170 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 DCAF12Q5T6F0 453 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 OR2C3Q8N628 320 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 EXTL1Q92935 676 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 FAAP24Q9BTP7 215 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 TNFSF18Q9UNG2 199 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 HDGFL3Q9Y3E1 203 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 LY75O60449 1722 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 KIAA1217Q5T5P2 1943 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 RBFOX3A6NFN3 312 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 SHISA8B8ZZ34 492 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 PGA3P0DJD8 388 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 B4GALT1P15291 398 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 GABRA4P48169 554 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 EIF4EBP2Q13542 120 aaPredicted RBP14.21□□□□□ -0.13
COL17A1-202ENST00000369733 LPAL2Q16609 132 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 MRGPREQ86SM8 312 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 SPSB1Q96BD6 273 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 ADGRG7Q96K78 797 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 SDK1Q7Z5N4 2213 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 ENSAO43768 121 aaKnown RBP14.21□□□□□ -0.13
COL17A1-202ENST00000369733 CYB561P49447 251 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 C20orf196Q8IYI0 205 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 ADAT1Q9BUB4 502 aaKnown RBP14.21□□□□□ -0.13
COL17A1-202ENST00000369733 SSUH2Q9Y2M2 353 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 AMDHD2Q9Y303 409 aa14.21□□□□□ -0.13
COL17A1-202ENST00000369733 HLA-DRB3P79483 266 aa14.21□□□□□ -0.14
COL17A1-202ENST00000369733 ZNF468Q5VIY5 522 aaPredicted RBP14.21□□□□□ -0.14
COL17A1-202ENST00000369733 RABEPKQ7Z6M1 372 aa14.21□□□□□ -0.14
COL17A1-202ENST00000369733 OR5B3Q8NH48 314 aa14.21□□□□□ -0.14
COL17A1-202ENST00000369733 ELOA3CA0A087WX78 387 aaPredicted RBP14.21□□□□□ -0.14
COL17A1-202ENST00000369733 RER1O15258 196 aa14.21□□□□□ -0.14
COL17A1-202ENST00000369733 CFDP00746 253 aaPredicted RBP14.21□□□□□ -0.14
COL17A1-202ENST00000369733 MESTQ5EB52 335 aa14.21□□□□□ -0.14
COL17A1-202ENST00000369733 OR11L1Q8NGX0 322 aa14.21□□□□□ -0.14
COL17A1-202ENST00000369733 OR4C45A6NMZ5 311 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 TNFSF11O14788 317 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 GCM2O75603 506 aaPredicted RBP14.2□□□□□ -0.14
COL17A1-202ENST00000369733 VSIG10L2P0DP72 767 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 OR8G1Q15617 311 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 TMEM241Q24JQ0 296 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 TMEM196Q5HYL7 178 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 CMTM2Q8TAZ6 248 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 A0A096LPE4 126 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 IGHV3-64DA0A0J9YX35 117 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 C3orf85A0A1B0GTC6 90 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 A0A1W2PPZ6 126 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 PDCD1Q15116 288 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 SHHQ15465 462 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 KLHDC1Q8N7A1 406 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 OR1N1Q8NGS0 311 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 USB1Q9BQ65 265 aaKnown RBP14.2□□□□□ -0.14
COL17A1-202ENST00000369733 CTDSP1Q9GZU7 261 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 ZNF107Q9UII5 783 aaPredicted RBP14.2□□□□□ -0.14
COL17A1-202ENST00000369733 MYBPHQ13203 477 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 DCAF12L2Q5VW00 463 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 CBLN3Q6UW01 205 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 SLC24A4Q8NFF2 622 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 MMP17Q9ULZ9 603 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 ARL2-SNX15V9GYD0 113 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 A0A087X0M5 115 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 A0A1B0GX30 115 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 CDK2AP1O14519 115 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 F12P00748 615 aaPredicted RBP14.2□□□□□ -0.14
COL17A1-202ENST00000369733 GPR12P47775 334 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 SULT1A1P50225 295 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 COX14Q96I36 57 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 SERGEFQ9UGK8 458 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 DUSP13Q9UII6 198 aa14.2□□□□□ -0.14
COL17A1-202ENST00000369733 URB1O60287 2271 aaKnown RBP14.2□□□□□ -0.14
COL17A1-202ENST00000369733 EFNB2P52799 333 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms