RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 RHBDL2Q9NX52 303 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 ZNF224Q9NZL3 707 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 MYEF2Q9P2K5 600 aaKnown RBP8.54□□□□□ -1.04
TPM3-210ENST00000368530 ARPC4-TTLL3A0A0A6YYG9 625 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 MEGF11A6BM72 1044 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 OR5H1A6NKK0 313 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 ABCD4O14678 606 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 LANCL1O43813 399 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 RAB3AP20336 220 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 CCL1P22362 96 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 CCNOP22674 350 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 HTR2CP28335 458 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 POU3F4P49335 361 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 DGCR2P98153 550 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 LOXL1Q08397 574 aaPredicted RBP8.54□□□□□ -1.04
TPM3-210ENST00000368530 RIN1Q13671 783 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 C2orf76Q3KRA6 126 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 KRTAP24-1Q3LI83 254 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 SLC36A2Q495M3 483 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 HIKESHIQ53FT3 197 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 TIMM23BQ5SRD1 257 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 RNF144BQ7Z419 303 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 CPEB3Q8NE35 698 aaKnown RBP8.54□□□□□ -1.04
TPM3-210ENST00000368530 OR5D14Q8NGL3 314 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 OR14K1Q8NGZ2 314 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 NPRL2Q8WTW4 380 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 GCDHQ92947 438 aaPredicted RBP8.54□□□□□ -1.04
TPM3-210ENST00000368530 SGK3Q96BR1 496 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 SPACA5Q96QH8 159 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 SP140LQ9H930 580 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 TMEM160Q9NX00 188 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 ETV7Q9Y603 341 aa8.54□□□□□ -1.04
TPM3-210ENST00000368530 A0A0U1RQV5 110 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 LOC100289279A0A1B0GTE1 492 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 TMEM272A0A1B0GTI8 110 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 SULT1B1O43704 296 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 PFDN1O60925 122 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 TMEM127O75204 238 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 UBL3O95164 117 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 CCL2P13500 99 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 FAHP16930 419 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 CDK2P24941 298 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 MPGP29372 298 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 PITPNAQ00169 270 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 ASAH1Q13510 395 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 STK11Q15831 433 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 NRN1LQ496H8 165 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 TMEM69Q5SWH9 247 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 AGAP6Q5VW22 663 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 FBXW9Q5XUX1 488 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 NRARPQ7Z6K4 114 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 NKAIN3Q8N8D7 197 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 OR4D6Q8NGJ1 314 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 OR6M1Q8NGM8 313 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 OR1K1Q8NGR3 316 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 SETD6Q8TBK2 473 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 SLC25A28Q96A46 364 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 RFT1Q96AA3 541 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 S100A16Q96FQ6 103 aaKnown RBP8.53□□□□□ -1.04
TPM3-210ENST00000368530 REEP6Q96HR9 211 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 CMTM3Q96MX0 182 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 NEDD4LQ96PU5 975 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 THAP7Q9BT49 309 aaPredicted RBP8.53□□□□□ -1.04
TPM3-210ENST00000368530 MRI1Q9BV20 369 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 CACNG6Q9BXT2 260 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 C11orf54Q9H0W9 315 aaPredicted RBP8.53□□□□□ -1.04
TPM3-210ENST00000368530 TMEM138Q9NPI0 162 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 CDC42EP3Q9UKI2 254 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 PIGLQ9Y2B2 252 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 SLC25A15Q9Y619 301 aa8.53□□□□□ -1.04
TPM3-210ENST00000368530 YLPM1P49750 1951 aaKnown RBP8.52□□□□□ -1.05
TPM3-210ENST00000368530 LOC100509620A0A075B734 347 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 C5orf49A4QMS7 147 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 PLA2G10O15496 165 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 DHRS3O75911 302 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 IGLV3-1P01715 115 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 HCKP08631 526 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 CD3GP09693 182 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 PTHLHP12272 177 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 NR4A2P43354 598 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 RFX2P48378 723 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 RAB1AP62820 205 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 KRTAP27-1Q3LI81 207 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 OR10K2Q6IF99 312 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 FAM166AQ6J272 317 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 TMEM53Q6P2H8 277 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 CCBE1Q6UXH8 406 aaPredicted RBP8.52□□□□□ -1.05
TPM3-210ENST00000368530 BAIAP2L2Q6UXY1 529 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 PGAP1Q75T13 922 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 OR5AS1Q8N127 324 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 ZNF525Q8N782 197 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 OR52H1Q8NGJ2 320 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 RAB40AQ8WXH6 277 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 HAVCR1Q96D42 359 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 MUCL1Q96DR8 90 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 RADILQ96JH8 1075 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 SORCS2Q96PQ0 1159 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 DHRS9Q9BPW9 319 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 SLC22A4Q9H015 551 aa8.52□□□□□ -1.05
TPM3-210ENST00000368530 ATG5Q9H1Y0 275 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms