RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 OR4D10Q8NGI6 311 aa12.91□□□□□ -0.34
NEK2-201ENST00000366998 DEDD2Q8WXF8 326 aa12.91□□□□□ -0.34
NEK2-201ENST00000366998 IFT46Q9NQC8 304 aa12.91□□□□□ -0.34
NEK2-201ENST00000366998 CRIM1Q9NZV1 1036 aa12.91□□□□□ -0.34
NEK2-201ENST00000366998 PIEZO2Q9H5I5 2752 aa12.9□□□□□ -0.34
NEK2-201ENST00000366998 A8MV72 311 aaPredicted RBP12.9□□□□□ -0.34
NEK2-201ENST00000366998 MELTFP08582 738 aa12.9□□□□□ -0.34
NEK2-201ENST00000366998 GSTP1P09211 210 aaKnown RBP12.9□□□□□ -0.34
NEK2-201ENST00000366998 CBR1P16152 277 aa12.9□□□□□ -0.34
NEK2-201ENST00000366998 HIST1H1DP16402 221 aaKnown RBP12.9□□□□□ -0.34
NEK2-201ENST00000366998 CPT2P23786 658 aa12.9□□□□□ -0.34
NEK2-201ENST00000366998 TIMP3P35625 211 aa12.9□□□□□ -0.34
NEK2-201ENST00000366998 EIF2B2P49770 351 aaKnown RBP12.9□□□□□ -0.34
NEK2-201ENST00000366998 P2RY6Q15077 328 aa12.9□□□□□ -0.34
NEK2-201ENST00000366998 LINC00303Q3SY05 128 aa12.9□□□□□ -0.34
NEK2-201ENST00000366998 PLAC9Q5JTB6 97 aa12.9□□□□□ -0.34
NEK2-201ENST00000366998 TMEM229BQ8NBD8 167 aa12.9□□□□□ -0.34
NEK2-201ENST00000366998 OR56B4Q8NH76 319 aa12.9□□□□□ -0.34
NEK2-201ENST00000366998 DACT3Q96B18 629 aaPredicted RBP12.9□□□□□ -0.34
NEK2-201ENST00000366998 WBP1Q96G27 269 aa12.9□□□□□ -0.34
NEK2-201ENST00000366998 CCDC120Q96HB5 630 aa12.9□□□□□ -0.34
NEK2-201ENST00000366998 ARHGAP5-AS1Q96IT6 56 aa12.9□□□□□ -0.34
NEK2-201ENST00000366998 OR10A4Q9H209 315 aa12.9□□□□□ -0.34
NEK2-201ENST00000366998 ZGRF1Q86YA3 2104 aa12.9□□□□□ -0.34
NEK2-201ENST00000366998 PRRG2O14669 202 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 SMPD2O60906 423 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 CST4P01036 141 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 HOXD4P09016 255 aaPredicted RBP12.89□□□□□ -0.35
NEK2-201ENST00000366998 TRAPPC2P0DI81 140 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 TRAPPC2BP0DI82 140 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 GABRR1P24046 479 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 BLVRBP30043 206 aaPredicted RBP12.89□□□□□ -0.35
NEK2-201ENST00000366998 TMEM50BP56557 158 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 GFRALQ6UXV0 394 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 C17orf78Q8N4C9 275 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 BEX2Q9BXY8 128 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 ACTR6Q9GZN1 396 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 BEX1Q9HBH7 125 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 ZNF629Q9UEG4 869 aaPredicted RBP12.89□□□□□ -0.35
NEK2-201ENST00000366998 FLVCR2Q9UPI3 526 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 ANKRD30BLA7E2S9 258 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 ZNF736B4DX44 427 aaPredicted RBP12.89□□□□□ -0.35
NEK2-201ENST00000366998 J3QW42 95 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 M0QYG6 137 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 ARPC1BO15143 372 aaKnown RBP12.89□□□□□ -0.35
NEK2-201ENST00000366998 RAB3DO95716 219 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 PPP1CBP62140 327 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 PDZK1IP1Q13113 114 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 OR2T2Q6IF00 324 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 FAM89BQ8N5H3 189 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 GVQW1Q8N7I0 195 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 BOD1Q96IK1 185 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 HIST1H2AAQ96QV6 131 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 TM2D1Q9BX74 207 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 TP63Q9H3D4 680 aaPredicted RBP12.89□□□□□ -0.35
NEK2-201ENST00000366998 ZNF221Q9UK13 617 aa12.89□□□□□ -0.35
NEK2-201ENST00000366998 IGF2RP11717 2491 aa12.88□□□□□ -0.35
NEK2-201ENST00000366998 A0A0A6YYJ9 748 aa12.88□□□□□ -0.35
NEK2-201ENST00000366998 ZNF780AO75290 641 aaPredicted RBP12.88□□□□□ -0.35
NEK2-201ENST00000366998 GPM6AP51674 278 aa12.88□□□□□ -0.35
NEK2-201ENST00000366998 RAG2P55895 527 aa12.88□□□□□ -0.35
NEK2-201ENST00000366998 CBX3Q13185 183 aa12.88□□□□□ -0.35
NEK2-201ENST00000366998 ARFRP1Q13795 201 aa12.88□□□□□ -0.35
NEK2-201ENST00000366998 PRR30Q53SZ7 412 aaPredicted RBP12.88□□□□□ -0.35
NEK2-201ENST00000366998 OR4S1Q8NGB4 309 aa12.88□□□□□ -0.35
NEK2-201ENST00000366998 OR51S1Q8NGJ8 323 aa12.88□□□□□ -0.35
NEK2-201ENST00000366998 OR6F1Q8NGZ6 308 aa12.88□□□□□ -0.35
NEK2-201ENST00000366998 OR51F2Q8NH61 342 aa12.88□□□□□ -0.35
NEK2-201ENST00000366998 GIMAP1Q8WWP7 306 aa12.88□□□□□ -0.35
NEK2-201ENST00000366998 HPSE2Q8WWQ2 592 aa12.88□□□□□ -0.35
NEK2-201ENST00000366998 Q96M66 194 aa12.88□□□□□ -0.35
NEK2-201ENST00000366998 SFXN3Q9BWM7 321 aa12.88□□□□□ -0.35
NEK2-201ENST00000366998 MAP1BP46821 2468 aaKnown RBP12.87□□□□□ -0.35
NEK2-201ENST00000366998 IGKV1-12A0A0C4DH73 117 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 PQLC2LA1A4F0 135 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 MFNGO00587 321 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 SSX5O60225 188 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 PEX14O75381 377 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 NDUFB6O95139 128 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 IGKV1D-12P01611 117 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 IGKV3-15P01624 115 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 GLI4P10075 376 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 CEACAM8P31997 349 aaPredicted RBP12.87□□□□□ -0.35
NEK2-201ENST00000366998 RRAS2P62070 204 aaPredicted RBP12.87□□□□□ -0.35
NEK2-201ENST00000366998 PNLIPRP3Q17RR3 467 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 CEACAM21Q3KPI0 293 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 SLC25A26Q70HW3 274 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 CALHM1Q8IU99 346 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 ZNF611Q8N823 705 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 PXT1Q8NFP0 134 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 OR1J1Q8NGS3 322 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 SNRNP40Q96DI7 357 aaKnown RBP12.87□□□□□ -0.35
NEK2-201ENST00000366998 SLX1AQ9BQ83 275 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 GINS4Q9BRT9 223 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 PECRQ9BY49 303 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 OR2J1Q9GZK6 312 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 TINAGL1Q9GZM7 467 aaPredicted RBP12.87□□□□□ -0.35
NEK2-201ENST00000366998 OBP2BQ9NPH6 170 aa12.87□□□□□ -0.35
NEK2-201ENST00000366998 ZNF107Q9UII5 783 aaPredicted RBP12.87□□□□□ -0.35
NEK2-201ENST00000366998 SH3BGRL2Q9UJC5 107 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms