RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 ISG20Q96AZ6 181 aaKnown RBP-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 HAUS1Q96CS2 278 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 SNF8Q96H20 258 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 TESK2Q96S53 571 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 GABRG3Q99928 467 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 THTPAQ9BU02 230 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 PECRQ9BY49 303 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 TM6SF2Q9BZW4 377 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 TRABDQ9H4I3 376 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 LRRC40Q9H9A6 602 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 SND1-IT1Q9HBX3 110 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 PRMT8Q9NR22 394 aaPredicted RBP-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 TRIM10Q9UDY6 481 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 ING4Q9UNL4 249 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 B9D1Q9UPM9 204 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 ZFP30Q9Y2G7 519 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 HEY1Q9Y5J3 304 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 ZNF780BQ9Y6R6 833 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 ABCA12Q86UK0 2595 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 ABCC4O15439 1325 aa-0.99□□□□□ -2.57
RNU6-54P-201ENST00000365563 EIF4G1Q04637 1599 aaKnown RBP-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 IGHV3-64A0A075B6Q5 118 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 LOC110117498A0A087WWA1 95 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 A0A1W2PRV1 198 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 SMIM30A4D0T7 59 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 TRAPPC13A5PLN9 417 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 CDC7O00311 574 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 SYNGR1O43759 233 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 OR2T1O43869 369 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 FCMRO60667 390 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 EIF3JO75822 258 aaKnown RBP-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 FGFR1OPO95684 399 aaKnown RBP-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 GUSBP08236 651 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 IFITM1P13164 125 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 DNAJB1P25685 340 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 HSPA1LP34931 641 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 RAD52P43351 418 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 MAP2K4P45985 399 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 SLC18A1P54219 525 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 CTBP2P56545 445 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 FXYD6P3P58550 94 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 KIAA1024LP59773 190 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 ZNF117Q03924 483 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 KDSRQ06136 332 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 KLRB1Q12918 225 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 C1orf61Q13536 156 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 LGALS9BQ3B8N2 356 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 TMEM155Q4W5P6 130 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 C6orf52Q5T4I8 152 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 UBE2UQ5VVX9 321 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 GPR107Q5VW38 600 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 ZYG11AQ6WRX3 759 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 CCDC80Q76M96 950 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 DCXRQ7Z4W1 244 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 DOLPP1Q86YN1 238 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 ITPRIPQ8IWB1 547 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 CBR4Q8N4T8 237 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 FAM71CQ8NEG0 241 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 OR52M1Q8NGK5 317 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 OR1F12Q8NHA8 337 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 FAM57AQ8TBR7 257 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 SLC13A3Q8WWT9 602 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 PIBF1Q8WXW3 757 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 FAM3CQ92520 227 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 SNX21Q969T3 373 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 HIST1H2BAQ96A08 127 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 MRPL48Q96GC5 212 aaKnown RBP-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 RNF170Q96K19 258 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 SECISBP2Q96T21 854 aaKnown RBP-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 ZNF426Q9BUY5 554 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 SLC5A7Q9GZV3 580 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 TMEM117Q9H0C3 514 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 ROPN1Q9HAT0 212 aaPredicted RBP-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 SYTL2Q9HCH5 934 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 DCAF16Q9NXF7 216 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 CFDP1Q9UEE9 299 aaPredicted RBP-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 NDRG2Q9UN36 371 aaKnown RBP-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 DNAH3Q8TD57 4116 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 BAZ2BQ9UIF8 2168 aaKnown RBP-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 TNRC18O15417 2968 aaPredicted RBP-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 CELSR3Q9NYQ7 3312 aa-1□□□□□ -2.57
RNU6-54P-201ENST00000365563 PIEZO2Q9H5I5 2752 aa-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 MYH11P35749 1972 aa-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 NBPF19A0A087WUL8 3843 aa-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 TMSB15BA0A087X1C1 80 aa-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 C15orf38-AP3S2A0A0A6YYH1 394 aa-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 TRAV41A0A0B4J266 112 aa-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 CCL15-CCL14A0A0B4J2E2 113 aa-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 XKRY2A2RUG3 117 aa-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 LRRIQ3A6PVS8 624 aaPredicted RBP-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 C2orf74A8MZ97 194 aa-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 RNASEK-C17orf49H0YIS7 233 aa-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 SDHDO14521 159 aa-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 EEF1E1O43324 174 aaKnown RBP-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 SPOPO43791 374 aa-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 RAMP3O60896 148 aa-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 EEDO75530 441 aaKnown RBP-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 GPR75O95800 540 aa-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 PDYNP01213 254 aa-1.01□□□□□ -2.57
RNU6-54P-201ENST00000365563 APOA4P06727 396 aa-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms