RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 DISP1Q96F81 1524 aa-0.76□□□□□ -2.53
RNU6-238P-201ENST00000363313 NCOR2Q9Y618 2525 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 IGHV3-43A0A0B4J1X8 118 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 SNRPAP09012 282 aaKnown RBP-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 CTLA4P16410 223 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 GAP43P17677 238 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 PBLDP30039 288 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 MYCNOSP40205 109 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 TMEM236Q5W0B7 351 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 LGALS9CQ6DKI2 356 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 ZFP82Q8N141 532 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 OR8S1Q8NH09 359 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 OR5B3Q8NH48 314 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 MFSD8Q8NHS3 518 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 ORAOV1Q8WV07 137 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 ISG20Q96AZ6 181 aaKnown RBP-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 SMARCD1Q96GM5 515 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 RDH12Q96NR8 316 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 Q9BRP9 147 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 MFSD1Q9H3U5 465 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 MRM3Q9HC36 420 aaKnown RBP-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 SLC39A1Q9NY26 324 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 MRPS7Q9Y2R9 242 aaKnown RBP-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 CACNA1BQ00975 2339 aa-0.77□□□□□ -2.53
RNU6-238P-201ENST00000363313 IGHV6-1A0A0B4J1U7 121 aa-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 K7EQM0 130 aa-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 TRAPPC3O43617 180 aa-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 CLDN11O75508 207 aa-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 MCF2P10911 925 aa-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 KRT13P13646 458 aa-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 NCF1P14598 390 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 STMN1P16949 149 aa-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 NAA10P41227 235 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 ELOCQ15369 112 aa-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 BCL2A1Q16548 175 aa-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 ZNF791Q3KP31 576 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 REEP3Q6NUK4 255 aa-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 RGS9BPQ6ZS82 235 aa-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 Q6ZSR3 168 aa-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 CBLN2Q8IUK8 224 aa-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 OR5H2Q8NGV7 314 aa-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 FXYD5Q96DB9 178 aa-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 CCDC59Q9P031 241 aaKnown RBP-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 PTBP2Q9UKA9 531 aaKnown RBP-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 DDX49Q9Y6V7 483 aaKnown RBP-0.78□□□□□ -2.53
RNU6-238P-201ENST00000363313 RTTNQ86VV8 2226 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 NSD1Q96L73 2696 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 IGKV1D-42A0A075B6H8 117 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 TRBV24-1A0A075B6N3 115 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 KLRC4-KLRK1H3BQV0 150 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 SCAMP2O15127 329 aaKnown RBP-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 C1QCP02747 245 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 PGA5P0DJD9 388 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 SLC18A1P54219 525 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 IRF8Q02556 426 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 PSMD5Q16401 504 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 TIMM23BQ5SRD1 257 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 SLC22A9Q8IVM8 553 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 ITPRIPQ8IWB1 547 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 LRRC75A-AS1Q8N1F1 130 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 ARL10Q8N8L6 244 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 OR10W1Q8NGF6 305 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 GABARAPL1Q9H0R8 117 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 HEBP1Q9NRV9 189 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 TREX1Q9NSU2 369 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 OR5V1Q9UGF6 321 aa-0.79□□□□□ -2.54
RNU6-238P-201ENST00000363313 NPHP4O75161 1426 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 A0A1W2PRG6 482 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 K7EPK0 472 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 OR4Q2P0C623 313 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 PGA4P0DJD7 388 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 PGA3P0DJD8 388 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 ZNF7P17097 686 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 USF1P22415 310 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 PAX6P26367 422 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 GGT2P36268 569 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 PPICP45877 212 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 ZNF33AQ06730 810 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 VPS26BQ4G0F5 336 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 GCSAMLQ5JQS6 135 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 OR1S1Q8NH92 325 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 CCDC47Q96A33 483 aaKnown RBP-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 RIBC2Q9H4K1 309 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 MED9Q9NWA0 146 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 ACTR3BQ9P1U1 418 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 CYB5R1Q9UHQ9 305 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 ARHGAP32A7KAX9 2087 aa-0.8□□□□□ -2.54
RNU6-238P-201ENST00000363313 TRPM6Q9BX84 2022 aa-0.81□□□□□ -2.54
RNU6-238P-201ENST00000363313 CELSR1Q9NYQ6 3014 aa-0.81□□□□□ -2.54
RNU6-238P-201ENST00000363313 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.81□□□□□ -2.54
RNU6-238P-201ENST00000363313 F5H5P2 479 aa-0.81□□□□□ -2.54
RNU6-238P-201ENST00000363313 H7C0C1 242 aa-0.81□□□□□ -2.54
RNU6-238P-201ENST00000363313 MYL12BO14950 172 aa-0.81□□□□□ -2.54
RNU6-238P-201ENST00000363313 MRPS14O60783 128 aaKnown RBP-0.81□□□□□ -2.54
RNU6-238P-201ENST00000363313 SNNO75324 88 aaPredicted RBP-0.81□□□□□ -2.54
RNU6-238P-201ENST00000363313 CXCR1P25024 350 aa-0.81□□□□□ -2.54
RNU6-238P-201ENST00000363313 HTR2CP28335 458 aa-0.81□□□□□ -2.54
RNU6-238P-201ENST00000363313 GNRHRP30968 328 aa-0.81□□□□□ -2.54
RNU6-238P-201ENST00000363313 ATP5OP48047 213 aa-0.81□□□□□ -2.54
RNU6-238P-201ENST00000363313 RAB11AP62491 216 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms