RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 RGS6P49758 472 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 PITPNAQ00169 270 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 PIGHQ14442 188 aaPredicted RBP2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 PRSS8Q16651 343 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 FBXL19-AS1Q494R0 122 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 CDNFQ49AH0 187 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 TTC32Q5I0X7 151 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 THOC7Q6I9Y2 204 aaKnown RBP2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 FAHD1Q6P587 224 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 UNQ9165/PRO28630Q6UXU0 137 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 RBM45Q8IUH3 476 aaKnown RBP2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 SLC35G3Q8N808 338 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 SLC25A29Q8N8R3 303 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 CYB561A3Q8NBI2 242 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 OR4M2Q8NGB6 313 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 OR13G1Q8NGZ3 307 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 CPNE4Q96A23 557 aaPredicted RBP2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 TMEM159Q96B96 161 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 PRRG3Q9BZD7 231 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 COA1Q9GZY4 146 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 RMND1Q9NWS8 449 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 AP3M1Q9Y2T2 418 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 WIF1Q9Y5W5 379 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 S4R3C0 116 aa2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 NPHP4O75161 1426 aaPredicted RBP2.17□□□□□ -2.06
RNU6-28P-201ENST00000362378 CABIN1Q9Y6J0 2220 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 TRAV40A0A0B4J280 105 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 IGHV1-3A0A0C4DH29 117 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 RAB19A4D1S5 217 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 COLCA2A8K830 154 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 RNF113AO15541 343 aaKnown RBP2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 RRP8O43159 456 aaKnown RBP2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 SCO1O75880 301 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 LCN1P31025 176 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 PMELP40967 661 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 KCNJ3P48549 501 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 DNASE1L1P49184 302 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 PPP1CAP62136 330 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 TNNC1P63316 161 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZNF616Q08AN1 781 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 TNXAQ16473 311 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 PSG3Q16557 428 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 SYT6Q5T7P8 510 aaPredicted RBP2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZNF101Q8IZC7 436 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 OSR2Q8N2R0 312 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 RNF10Q8N5U6 811 aaKnown RBP2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 OR2M7Q8NG81 312 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 OR5M1Q8NGP8 315 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 NT5CQ8TCD5 201 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 RTN4IP1Q8WWV3 396 aaPredicted RBP2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 CTRCQ99895 268 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 PORCNQ9H237 461 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 ZSCAN16Q9H4T2 348 aaPredicted RBP2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 PRORYQ9H606 182 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 WDR55Q9H6Y2 383 aaPredicted RBP2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 FBXO6Q9NRD1 293 aaPredicted RBP2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 SDHAF2Q9NX18 166 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 PRO0461Q9UI25 63 aa2.16□□□□□ -2.06
RNU6-28P-201ENST00000362378 DOCK9Q9BZ29 2069 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 IGLV3-12A0A075B6K2 115 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 SLC5A10A0PJK1 596 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 YKT6O15498 198 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 NDUFS5O43920 106 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 NEMFO60524 1076 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 RCBTB2O95199 551 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 IGKV1D-16P01601 117 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 CD8AP01732 235 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 RPN2P04844 631 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 IL4P05112 153 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 NELFEP18615 380 aaKnown RBP2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 PSMB2P49721 201 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 CMC4P56277 68 aaPredicted RBP2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 OR12D2P58182 307 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 C2orf80Q0P641 193 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 DMC1Q14565 340 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 ACTL10Q5JWF8 245 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 KHDRBS2Q5VWX1 349 aaKnown RBP2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 FAM19A1Q7Z5A9 133 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 NELFCDQ8IXH7 590 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 ORMDL3Q8N138 153 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 ZNF709Q8N972 641 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 ZBED3Q96IU2 234 aaPredicted RBP2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 CPB2Q96IY4 423 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 PDCD1LG2Q9BQ51 273 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 ZNF649Q9BS31 505 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 TMED9Q9BVK6 235 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 ZNF717Q9BY31 904 aaPredicted RBP2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 ACOT13Q9NPJ3 140 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 DDIT4Q9NX09 232 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 CLEC2DQ9UHP7 191 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 RAB23Q9ULC3 237 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 ZNF835Q9Y2P0 537 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 TSPOAP1O95153 1857 aa2.15□□□□□ -2.07
RNU6-28P-201ENST00000362378 TMEM72A0PK05 275 aa2.14□□□□□ -2.07
RNU6-28P-201ENST00000362378 ISPDA4D126 451 aa2.14□□□□□ -2.07
RNU6-28P-201ENST00000362378 MGAT4DA6NG13 374 aa2.14□□□□□ -2.07
RNU6-28P-201ENST00000362378 K7ERQ8 282 aa2.14□□□□□ -2.07
RNU6-28P-201ENST00000362378 UPK1AO00322 258 aa2.14□□□□□ -2.07
RNU6-28P-201ENST00000362378 CST4P01036 141 aa2.14□□□□□ -2.07
RNU6-28P-201ENST00000362378 ZNF286BP0CG31 522 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms