RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 PNLIPP16233 465 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 APOBEC1P41238 236 aaKnown RBP12.11□□□□□ -0.47
SGMS1-202ENST00000361781 LPAR6P43657 344 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 HOXA1P49639 335 aaPredicted RBP12.11□□□□□ -0.47
SGMS1-202ENST00000361781 SCAND1P57086 179 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 HFEQ30201 348 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 GJC3Q8NFK1 279 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 ZNF426Q9BUY5 554 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 RTN4RQ9BZR6 473 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 FNDC1Q4ZHG4 1894 aaPredicted RBP12.11□□□□□ -0.47
SGMS1-202ENST00000361781 TMEM127O75204 238 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 CST4P01036 141 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 TK1P04183 234 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 OTX2P32243 289 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 NKX2-1P43699 371 aaPredicted RBP12.11□□□□□ -0.47
SGMS1-202ENST00000361781 ISXQ2M1V0 245 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 SSX9Q7RTT3 188 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 RTN4RL2Q86UN3 420 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 LGI3Q8N145 548 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 OR10G3Q8NGC4 313 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 OR1N1Q8NGS0 311 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 OR1L3Q8NH93 324 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 GPHA2Q96T91 129 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 RAB18Q9NP72 206 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 GHRLQ9UBU3 117 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 PTRH2Q9Y3E5 179 aaKnown RBP12.11□□□□□ -0.47
SGMS1-202ENST00000361781 TRPM7Q96QT4 1865 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 PLXNA4Q9HCM2 1894 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 HSPB2A8KAH6 182 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 G3V3Q6 166 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 ABHD16AO95870 558 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 OR5AC1P0C628 307 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 CD79AP11912 226 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 ELLP55199 621 aaPredicted RBP12.11□□□□□ -0.47
SGMS1-202ENST00000361781 HSPB2Q16082 182 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 ZNF260Q3ZCT1 412 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 C9orf40Q8IXQ3 194 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 CMTM1Q8IZ96 169 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 PRO1933Q9H354 126 aa12.11□□□□□ -0.47
SGMS1-202ENST00000361781 A0A087WZY1 265 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 MEX3AA1L020 520 aaKnown RBP12.1□□□□□ -0.47
SGMS1-202ENST00000361781 SMCO3A2RU48 225 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 CYB5BO43169 146 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 IFNA4P05014 189 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 THEM4Q5T1C6 240 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 SLC22A18ASQ8N1D0 253 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 FBXL14Q8N1E6 418 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 BMPERQ8N8U9 685 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 OR10D4PQ8NGN7 298 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 SDSLQ96GA7 329 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 ZNF318Q5VUA4 2279 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 FAM24AA6NFZ4 105 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 TAAR5O14804 337 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 SCAF4O95104 1147 aaKnown RBP12.1□□□□□ -0.47
SGMS1-202ENST00000361781 S100A8P05109 93 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 FPR2P25090 351 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 FASLGP48023 281 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 DVL1P1P54792 670 aaPredicted RBP12.1□□□□□ -0.47
SGMS1-202ENST00000361781 PLAURQ03405 335 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 FBXO46Q6PJ61 603 aaPredicted RBP12.1□□□□□ -0.47
SGMS1-202ENST00000361781 SLC16A14Q7RTX9 510 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 ASB13Q8WXK3 278 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 GNRHR2Q96P88 292 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 ALKBH3Q96Q83 286 aaPredicted RBP12.1□□□□□ -0.47
SGMS1-202ENST00000361781 NAA11Q9BSU3 229 aaPredicted RBP12.1□□□□□ -0.47
SGMS1-202ENST00000361781 C8orf33Q9H7E9 229 aaPredicted RBP12.1□□□□□ -0.47
SGMS1-202ENST00000361781 NECAP2Q9NVZ3 263 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 MMP17Q9ULZ9 603 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 KIAA2026Q5HYC2 2103 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 A0A1W2PPC4 97 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 HMGB3O15347 200 aaKnown RBP12.1□□□□□ -0.47
SGMS1-202ENST00000361781 EIF3GO75821 320 aaKnown RBP eCLIP12.1□□□□□ -0.47
SGMS1-202ENST00000361781 TBPP20226 339 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 ANKRD55Q3KP44 614 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 Q7L0L9 218 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 ZNF611Q8N823 705 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 OR1J1Q8NGS3 322 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 HPSE2Q8WWQ2 592 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 SPIN2AQ99865 258 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 SPIN2BQ9BPZ2 258 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 SEC11CQ9BY50 192 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 GFOD1Q9NXC2 390 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 GAB2Q9UQC2 676 aa12.1□□□□□ -0.47
SGMS1-202ENST00000361781 A0A1W2PR80 420 aa12.09□□□□□ -0.47
SGMS1-202ENST00000361781 YIF1AO95070 293 aa12.09□□□□□ -0.47
SGMS1-202ENST00000361781 ZNF345Q14585 488 aa12.09□□□□□ -0.47
SGMS1-202ENST00000361781 BATFQ16520 125 aa12.09□□□□□ -0.47
SGMS1-202ENST00000361781 ZNF239Q16600 458 aaKnown RBP12.09□□□□□ -0.47
SGMS1-202ENST00000361781 FAM209BQ5JX69 171 aa12.09□□□□□ -0.47
SGMS1-202ENST00000361781 C19orf12Q9NSK7 152 aa12.09□□□□□ -0.47
SGMS1-202ENST00000361781 LHX6Q9UPM6 363 aa12.09□□□□□ -0.47
SGMS1-202ENST00000361781 IGKV1D-43A0A0B4J1Z2 117 aa12.09□□□□□ -0.47
SGMS1-202ENST00000361781 E5RGE8 158 aa12.09□□□□□ -0.47
SGMS1-202ENST00000361781 HPNP05981 417 aa12.09□□□□□ -0.47
SGMS1-202ENST00000361781 CD1AP06126 327 aa12.09□□□□□ -0.47
SGMS1-202ENST00000361781 SLC25A4P12235 298 aa12.09□□□□□ -0.47
SGMS1-202ENST00000361781 MDKP21741 143 aaPredicted RBP12.09□□□□□ -0.47
SGMS1-202ENST00000361781 RPS16P62249 146 aaKnown RBP12.09□□□□□ -0.47
SGMS1-202ENST00000361781 ADIRFQ15847 76 aa12.09□□□□□ -0.47
SGMS1-202ENST00000361781 LYZL2Q7Z4W2 148 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms