RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 IDH3GP51553 393 aaPredicted RBP11.25□□□□□ -0.61
VAMP1-201ENST00000361716 PRSS12P56730 875 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 SLC26A5P58743 744 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 TNFRSF9Q07011 255 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 PHLDA2Q53GA4 152 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 LANCL3Q6ZV70 420 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 BATF2Q8N1L9 274 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 TSLPQ969D9 159 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 ARHGAP5-AS1Q96IT6 56 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 MMP25Q9NPA2 562 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 MTCL1Q9Y4B5 1905 aaKnown RBP11.25□□□□□ -0.61
VAMP1-201ENST00000361716 ZFP92A6NM28 416 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 CTLA4P16410 223 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 CSRP1P21291 193 aaKnown RBP11.25□□□□□ -0.61
VAMP1-201ENST00000361716 EGR3Q06889 387 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 PARM1Q6UWI2 310 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 HOGA1Q86XE5 327 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 SULF2Q8IWU5 870 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 SGPP2Q8IWX5 399 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 ZNF664Q8N3J9 261 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.25□□□□□ -0.61
VAMP1-201ENST00000361716 FOXQ1Q9C009 403 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 SLC17A5Q9NRA2 495 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 PILRAQ9UKJ1 303 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 PADI1Q9ULC6 663 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 SLC7A11Q9UPY5 501 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 HIF3AQ9Y2N7 669 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 TMEM184BQ9Y519 407 aaPredicted RBP11.25□□□□□ -0.61
VAMP1-201ENST00000361716 WIPF3A6NGB9 483 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 UTS2O95399 124 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 MELTFP08582 738 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 GP1BBP13224 206 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 HLA-GP17693 338 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 IGFBP4P22692 258 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 ZNF93P35789 620 aaPredicted RBP11.25□□□□□ -0.61
VAMP1-201ENST00000361716 NUTF2P61970 127 aaKnown RBP11.25□□□□□ -0.61
VAMP1-201ENST00000361716 SRSF4Q08170 494 aaKnown RBP11.25□□□□□ -0.61
VAMP1-201ENST00000361716 UNC119Q13432 240 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 ABCA11PQ4W5N1 156 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 WDR25Q64LD2 544 aaPredicted RBP11.25□□□□□ -0.61
VAMP1-201ENST00000361716 OR13H1Q8NG92 308 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 OR51T1Q8NGJ9 327 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 MUCL1Q96DR8 90 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 MESP1Q9BRJ9 268 aa11.25□□□□□ -0.61
VAMP1-201ENST00000361716 MYOZ1Q9NP98 299 aaPredicted RBP11.25□□□□□ -0.61
VAMP1-201ENST00000361716 FAM157AC9JC47 383 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 SLC6A9P48067 706 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 SCAND1P57086 179 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 RPL23AP62750 156 aaKnown RBP11.24□□□□□ -0.61
VAMP1-201ENST00000361716 RPP30P78346 268 aaKnown RBP11.24□□□□□ -0.61
VAMP1-201ENST00000361716 ELOBQ15370 118 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 NCR3LG1Q68D85 454 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 FGF14Q92915 247 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 GALNT14Q96FL9 552 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 KLF15Q9UIH9 416 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 NPIPA5E9PKD4 350 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 SCGNO76038 276 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 MBPP02686 304 aaPredicted RBP11.24□□□□□ -0.61
VAMP1-201ENST00000361716 HNRNPA1P09651 372 aaKnown RBP eCLIP11.24□□□□□ -0.61
VAMP1-201ENST00000361716 NTSR1P30989 418 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 VAMP2P63027 116 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 POU3F1Q03052 451 aaPredicted RBP11.24□□□□□ -0.61
VAMP1-201ENST00000361716 TMEM196Q5HYL7 178 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 ALKBH2Q6NS38 261 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 AQP3Q92482 292 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 MVB12AQ96EY5 273 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 HIST1H2BLQ99880 126 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 MAGT1Q9H0U3 335 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 AK3Q9UIJ7 227 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 NPIPA1Q9UND3 350 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 GPR132Q9UNW8 380 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 STARD10Q9Y365 291 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 MMACHCQ9Y4U1 282 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 POMT1Q9Y6A1 747 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 AHCTF1Q8WYP5 2266 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 LTBP2Q14767 1821 aa11.24□□□□□ -0.61
VAMP1-201ENST00000361716 A0A0J9YY10 115 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 RBFOX3A6NFN3 312 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 HLA-DOBP13765 273 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 SLC37A1P57057 533 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 RAB38P57729 211 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 SUPT4H1P63272 117 aaKnown RBP11.23□□□□□ -0.61
VAMP1-201ENST00000361716 TIPARPQ7Z3E1 657 aaKnown RBP11.23□□□□□ -0.61
VAMP1-201ENST00000361716 FAM185AQ8N0U4 392 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 POC1AQ8NBT0 407 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 TMEM37Q8WXS4 190 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 SCGB3A2Q96PL1 93 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 GPR87Q9BY21 358 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 C1orf123Q9NWV4 160 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 LRFN1Q9P244 771 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 GOLT1BQ9Y3E0 138 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 TRBV6-7A0A0A0MS04 114 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 CT45A8P0DMV1 189 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 CT45A9P0DMV2 189 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 BCKDHBP21953 392 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 RPS4Y1P22090 263 aaKnown RBP11.23□□□□□ -0.61
VAMP1-201ENST00000361716 MLF1P58340 268 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 RPS4XP62701 263 aaKnown RBP11.23□□□□□ -0.61
VAMP1-201ENST00000361716 PLCXD2Q0VAA5 305 aa11.23□□□□□ -0.61
VAMP1-201ENST00000361716 NSDHLQ15738 373 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms