RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 RPS2P15880 293 aaKnown RBP16.5■□□□□ 0.23
CLIP2-202ENST00000361545 DEGS2Q6QHC5 323 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 LYG1Q8N1E2 194 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 OR4D11Q8NGI4 311 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 AKR7A2O43488 359 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 GIPP09681 153 aaPredicted RBP16.5■□□□□ 0.23
CLIP2-202ENST00000361545 ZBTB25P24278 435 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 PSMB6P28072 239 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 P2RX3P56373 397 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 C15orf54Q8N8G6 183 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 FAAP24Q9BTP7 215 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 RAB1BQ9H0U4 201 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 FBXO8Q9NRD0 319 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 TRAPPC4Q9Y296 219 aa16.5■□□□□ 0.23
CLIP2-202ENST00000361545 B4E171 279 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 OR2F2O95006 317 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 IGHV3-13P01766 116 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 IGHV3-7P01780 117 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 H2AFB1P0C5Y9 115 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 LIMS3P0CW19 117 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 LIMS4P0CW20 117 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 OR13C7P0DN81 318 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
CLIP2-202ENST00000361545 CEACAM6P40199 344 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 TSPAN7P41732 249 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 CSN1S1P47710 185 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 UBE2G1P62253 170 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 PSENENQ9NZ42 101 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 DOCK3Q8IZD9 2030 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 A0A1W2PPC1 479 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 KRASP01116 189 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 LCN15Q6UWW0 184 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 OR52N4Q8NGI2 321 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 SLC39A7Q92504 469 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 ERGIC1Q969X5 290 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 RPEQ96AT9 228 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 ZNF764Q96H86 408 aaPredicted RBP16.49■□□□□ 0.23
CLIP2-202ENST00000361545 NIPSNAP3BQ9BS92 247 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 H3BP45 60 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 CDX4O14627 284 aaPredicted RBP16.49■□□□□ 0.23
CLIP2-202ENST00000361545 SP1P08047 785 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 CELA2AP08217 269 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 OR3A4PP47883 348 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 FLI1Q01543 452 aaPredicted RBP16.49■□□□□ 0.23
CLIP2-202ENST00000361545 C17orf107Q6ZR85 190 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 LOXL4Q96JB6 756 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 NME2P1O60361 137 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 CRYBA1P05813 215 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 MESTQ5EB52 335 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 OR52B4Q8NGK2 314 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 TCEAL7Q9BRU2 100 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 UBTD1Q9HAC8 227 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 AK3Q9UIJ7 227 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 CCL27Q9Y4X3 112 aa16.49■□□□□ 0.23
CLIP2-202ENST00000361545 IGHV3-43A0A0B4J1X8 118 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 A0A1W2PRD5 423 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 A0A1W2PRF3 423 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 A0A1W2PRM7 423 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 OR5H14A6NHG9 310 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 NKX2-8O15522 239 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 OIP5O43482 229 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 IGHV3-43DP0DP04 118 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 MLF1P58340 268 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 NUFIP2Q7Z417 695 aaKnown RBP16.48■□□□□ 0.23
CLIP2-202ENST00000361545 C6orf201Q7Z4U5 140 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 AHCTF1Q8WYP5 2266 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 ZDBF2Q9HCK1 2354 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 SKP2Q13309 424 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 BATFQ16520 125 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 C17orf47Q8NEP4 570 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 CCL21O00585 134 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 DHODHQ02127 395 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 TERB2Q8NHR7 220 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 SF3B5Q9BWJ5 86 aaKnown RBP16.48■□□□□ 0.23
CLIP2-202ENST00000361545 MED9Q9NWA0 146 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 PILRBQ9UKJ0 227 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 ADAM20O43506 726 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 LIFP15018 202 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 RPL12P30050 165 aaKnown RBP16.48■□□□□ 0.23
CLIP2-202ENST00000361545 BAK1Q16611 211 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.48■□□□□ 0.23
CLIP2-202ENST00000361545 LINC00299Q6ZSB3 139 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 OR10AD1Q8NGE0 317 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 SMIM4Q8WVI0 70 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 CORO2AQ92828 525 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 LAMP3Q9UQV4 416 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 OR7C2O60412 319 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 OR2M3Q8NG83 312 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 ZNF721Q8TF20 911 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 MED30Q96HR3 178 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 ZNF275Q9NSD4 429 aaPredicted RBP16.48■□□□□ 0.23
CLIP2-202ENST00000361545 PSG11Q9UQ72 335 aa16.48■□□□□ 0.23
CLIP2-202ENST00000361545 ATAD5Q96QE3 1844 aa16.47■□□□□ 0.23
CLIP2-202ENST00000361545 GPR31O00270 319 aa16.47■□□□□ 0.23
CLIP2-202ENST00000361545 PLPP2O43688 288 aa16.47■□□□□ 0.23
CLIP2-202ENST00000361545 ZNF205O95201 554 aa16.47■□□□□ 0.23
CLIP2-202ENST00000361545 SRP14P37108 136 aaKnown RBP16.47■□□□□ 0.23
CLIP2-202ENST00000361545 DBPQ10586 325 aaPredicted RBP16.47■□□□□ 0.23
CLIP2-202ENST00000361545 SP6Q3SY56 376 aa16.47■□□□□ 0.23
CLIP2-202ENST00000361545 ERRFI1Q9UJM3 462 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms