RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 SGK3Q96BR1 496 aa19.74■□□□□ 0.75
LDB1-201ENST00000361198 CYYR1Q96J86 154 aa19.74■□□□□ 0.75
LDB1-201ENST00000361198 FN3KRPQ9HA64 309 aa19.74■□□□□ 0.75
LDB1-201ENST00000361198 LOC100509620A0A075B734 347 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 DBX1A6NMT0 343 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 ZNF32P17041 273 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 HGFACQ04756 655 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 LRRC37A5PQ49AS3 106 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 Q6ZSR3 168 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 C1QL2Q7Z5L3 287 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 HOGA1Q86XE5 327 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 FOXB1Q99853 325 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 CHST5Q9GZS9 411 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 FREM1Q5H8C1 2179 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 TSPAN4O14817 238 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 CRTAPO75718 401 aaPredicted RBP19.73■□□□□ 0.75
LDB1-201ENST00000361198 NAT1P18440 290 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 LUMP51884 338 aaPredicted RBP19.73■□□□□ 0.75
LDB1-201ENST00000361198 TMEM50BP56557 158 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 SRYQ05066 204 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 PLXDC2Q6UX71 529 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 ADAD2Q8NCV1 583 aaKnown RBP19.73■□□□□ 0.75
LDB1-201ENST00000361198 PP6455Q8WZ26 134 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 MS4A7Q9GZW8 240 aaPredicted RBP19.73■□□□□ 0.75
LDB1-201ENST00000361198 PCDHGA1Q9Y5H4 931 aa19.73■□□□□ 0.75
LDB1-201ENST00000361198 TPD52L2O43399 206 aaKnown RBP19.72■□□□□ 0.75
LDB1-201ENST00000361198 IFNA6P05013 189 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 GSTP1P09211 210 aaKnown RBP19.72■□□□□ 0.75
LDB1-201ENST00000361198 ZNF273Q14593 569 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 DRAM2Q6UX65 266 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 PNLDC1Q8NA58 520 aaKnown RBP19.72■□□□□ 0.75
LDB1-201ENST00000361198 OR52H1Q8NGJ2 320 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 OR2AE1Q8NHA4 323 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 AKR7LQ8NHP1 331 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 FBXW5Q969U6 566 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 OR10A2Q9H208 303 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 ABI3Q9P2A4 366 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 STMND1H3BQB6 276 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 MTRF1O75570 445 aaKnown RBP19.72■□□□□ 0.75
LDB1-201ENST00000361198 HPNP05981 417 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 PTGFRP43088 359 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 LHX2P50458 406 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 SCRN3Q0VDG4 424 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 FAM74A1Q5RGS3 127 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 RIPPLY2Q5TAB7 128 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 OR1F12Q8NHA8 337 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 RAB3CQ96E17 227 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 GPR35Q9HC97 309 aa19.72■□□□□ 0.75
LDB1-201ENST00000361198 FAM166BA8MTA8 275 aa19.71■□□□□ 0.75
LDB1-201ENST00000361198 LINC01387J3KSC0 135 aa19.71■□□□□ 0.75
LDB1-201ENST00000361198 MAGEA5P43359 124 aa19.71■□□□□ 0.75
LDB1-201ENST00000361198 SPEM2Q0P670 501 aa19.71■□□□□ 0.75
LDB1-201ENST00000361198 PDSS1Q5T2R2 415 aa19.71■□□□□ 0.75
LDB1-201ENST00000361198 FGFBP3Q8TAT2 258 aa19.71■□□□□ 0.75
LDB1-201ENST00000361198 ZNF75AQ96N20 296 aa19.71■□□□□ 0.75
LDB1-201ENST00000361198 TTTY12Q9BZ98 90 aa19.71■□□□□ 0.75
LDB1-201ENST00000361198 B4GALT7Q9UBV7 327 aa19.71■□□□□ 0.75
LDB1-201ENST00000361198 CEACAM18A8MTB9 384 aa19.71■□□□□ 0.75
LDB1-201ENST00000361198 IGHV3-9P01782 118 aa19.71■□□□□ 0.75
LDB1-201ENST00000361198 ATF4P18848 351 aaPredicted RBP19.71■□□□□ 0.75
LDB1-201ENST00000361198 PSG4Q00888 419 aa19.71■□□□□ 0.75
LDB1-201ENST00000361198 AIMP2Q13155 320 aaKnown RBP19.71■□□□□ 0.75
LDB1-201ENST00000361198 OR4K15Q8NH41 348 aa19.71■□□□□ 0.75
LDB1-201ENST00000361198 THAP6Q8TBB0 222 aa19.71■□□□□ 0.75
LDB1-201ENST00000361198 ZNF471Q9BX82 626 aaPredicted RBP19.71■□□□□ 0.75
LDB1-201ENST00000361198 NAT2P11245 290 aa19.7■□□□□ 0.74
LDB1-201ENST00000361198 HIST1H1DP16402 221 aaKnown RBP19.7■□□□□ 0.74
LDB1-201ENST00000361198 ACKR3P25106 362 aa19.7■□□□□ 0.74
LDB1-201ENST00000361198 TAS2R31P59538 309 aa19.7■□□□□ 0.74
LDB1-201ENST00000361198 PAN3Q58A45 887 aaKnown RBP19.7■□□□□ 0.74
LDB1-201ENST00000361198 VAX1Q5SQQ9 334 aa19.7■□□□□ 0.74
LDB1-201ENST00000361198 TERB2Q8NHR7 220 aa19.7■□□□□ 0.74
LDB1-201ENST00000361198 PIGTQ969N2 578 aa19.7■□□□□ 0.74
LDB1-201ENST00000361198 OR6C6A6NF89 314 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 PMP2P02689 132 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 FCGR2AP12318 317 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 AKR1C4P17516 323 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 VAMP1P23763 118 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 CLDN18P56856 261 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 SLC16A14Q7RTX9 510 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 C10orf35Q96D05 121 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 ARHGAP5-AS1Q96IT6 56 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 SLC6A15Q9H2J7 730 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 ALDH3B1P43353 468 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 HTR5AP47898 357 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 TSPO2Q5TGU0 170 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 SKA3Q8IX90 412 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 IL22RA1Q8N6P7 574 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 OR56B1Q8NGI3 324 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 CASTOR1Q8WTX7 329 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 HAS2Q92819 552 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 URM1Q9BTM9 101 aaKnown RBP19.69■□□□□ 0.74
LDB1-201ENST00000361198 TIMM10BQ9Y5J6 103 aa19.69■□□□□ 0.74
LDB1-201ENST00000361198 TRBV6-7A0A0A0MS04 114 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 FAM25EA8MYX2 175 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 RAD51DO75771 328 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 CRHP06850 196 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 PRSS12P56730 875 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 SNTB1Q13884 538 aaKnown RBP19.68■□□□□ 0.74
LDB1-201ENST00000361198 ATXN7L3Q14CW9 347 aaPredicted RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms