RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 OR1J2Q8NGS2 313 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 OR13C9Q8NGT0 318 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 THAP7Q9BT49 309 aaPredicted RBP11.07□□□□□ -0.64
GGPS1-202ENST00000358966 ABRACLQ9P1F3 81 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 KLK13Q9UKR3 277 aa11.07□□□□□ -0.64
GGPS1-202ENST00000358966 PTPRQQ9UMZ3 2332 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 BTBD17A6NE02 478 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 CYTIPO60759 359 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 GTF3C1Q12789 2109 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 GPR137CQ8N3F9 429 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 BOLLQ8N9W6 283 aaKnown RBP11.06□□□□□ -0.64
GGPS1-202ENST00000358966 NPRL2Q8WTW4 380 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 SLAMF9Q96A28 289 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 OPN3Q9H1Y3 402 aaPredicted RBP11.06□□□□□ -0.64
GGPS1-202ENST00000358966 C12orf49Q9H741 205 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 NPTNQ9Y639 398 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 NBASA2RRP1 2371 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 A0A1B0GTI1 187 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 HSPB2A8KAH6 182 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 MCRIP1C9JLW8 97 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 SLC34A2O95436 690 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 TCRBP04435 133 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 GABRA1P14867 456 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 CDK2P24941 298 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 PPT1P50897 306 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 RRADP55042 308 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 SLC10A1Q14973 349 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 HSPB2Q16082 182 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 CDPF1Q6NVV7 123 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 OR2AE1Q8NHA4 323 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 PHYHIPQ92561 330 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 HAS2Q92819 552 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 MARS2Q96GW9 593 aaKnown RBP11.06□□□□□ -0.64
GGPS1-202ENST00000358966 SF3B5Q9BWJ5 86 aaKnown RBP11.06□□□□□ -0.64
GGPS1-202ENST00000358966 PRRG4Q9BZD6 226 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 SLC7A10Q9NS82 523 aa11.06□□□□□ -0.64
GGPS1-202ENST00000358966 ATRXP46100 2492 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 MEIS3P1A6NDR6 274 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 MARCH11A6NNE9 402 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 CD2P06729 351 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 RAB2AP61019 212 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 SNAI3Q3KNW1 292 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 UBE2NLQ5JXB2 153 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 FAAP20Q6NZ36 180 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 DEGS2Q6QHC5 323 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 RTN4RL2Q86UN3 420 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 OR52N4Q8NGI2 321 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 OR10K1Q8NGX5 313 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 FAM46BQ96A09 425 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 C2orf88Q9BSF0 95 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 ZMAT3Q9HA38 289 aaKnown RBP11.05□□□□□ -0.64
GGPS1-202ENST00000358966 METTL1Q9UBP6 276 aaKnown RBP11.05□□□□□ -0.64
GGPS1-202ENST00000358966 CAMK2AQ9UQM7 478 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 MRPS18CQ9Y3D5 142 aaKnown RBP11.05□□□□□ -0.64
GGPS1-202ENST00000358966 PCNX1Q96RV3 2341 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 K7EM74 188 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 KLK10O43240 276 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 KRT33AO76009 404 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 F12P00748 615 aaPredicted RBP11.05□□□□□ -0.64
GGPS1-202ENST00000358966 ZNF44P15621 663 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 ZNF32P17041 273 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 S100A11P31949 105 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 GSG1Q2KHT4 349 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 MEIOBQ8N635 442 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 OR4D6Q8NGJ1 314 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 FOXB1Q99853 325 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 MRPL37Q9BZE1 423 aaKnown RBP11.05□□□□□ -0.64
GGPS1-202ENST00000358966 TMEM38BQ9NVV0 291 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 KLK11Q9UBX7 282 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 PLEKHA6Q9Y2H5 1048 aa11.05□□□□□ -0.64
GGPS1-202ENST00000358966 ARHGAP21Q5T5U3 1957 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 INTS1Q8N201 2190 aaKnown RBP11.04□□□□□ -0.64
GGPS1-202ENST00000358966 MRPL33O75394 65 aaKnown RBP11.04□□□□□ -0.64
GGPS1-202ENST00000358966 HPXP02790 462 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 UBCP0CG48 685 aaKnown RBP11.04□□□□□ -0.64
GGPS1-202ENST00000358966 CCL2P13500 99 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 ACHEP22303 614 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 ZNF84P51523 738 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 AKR1C2P52895 323 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 AKR1C1Q04828 323 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 NUFIP2Q7Z417 695 aaKnown RBP11.04□□□□□ -0.64
GGPS1-202ENST00000358966 GCNT2Q8N0V5 402 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 OR10J5Q8NHC4 309 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 HAVCR2Q8TDQ0 301 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 TCTEX1D2Q8WW35 142 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 RFT1Q96AA3 541 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 LYZL4Q96KX0 146 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 DPAGT1Q9H3H5 408 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 STEAP1Q9UHE8 339 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 TMEM238LA0A1B0GVL6 79 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 ZNF503-AS2A6NEH8 195 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 DNPH1O43598 174 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 ISG15P05161 165 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 IGFBP3P17936 291 aaPredicted RBP11.04□□□□□ -0.64
GGPS1-202ENST00000358966 ANXA7P20073 488 aaKnown RBP11.04□□□□□ -0.64
GGPS1-202ENST00000358966 HTR5AP47898 357 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 CCR6P51684 374 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 FOXC1Q12948 553 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 KCNMB1Q16558 191 aa11.04□□□□□ -0.64
GGPS1-202ENST00000358966 C2orf76Q3KRA6 126 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms