RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SLC7A10Q9NS82 523 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 FUT3P21217 361 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 TNFAIP6P98066 277 aaPredicted RBP12.09□□□□□ -0.47
SMC6-201ENST00000351948 ASAH1Q13510 395 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 KHDC1LQ5JSQ8 128 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 APCDD1LQ8NCL9 501 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 PCP4L1A6NKN8 68 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 OIT3Q8WWZ8 545 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 OR2H1Q9GZK4 316 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 NTMQ9P121 344 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 RPH3ALQ9UNE2 315 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 MPGP29372 298 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 GSK3AP49840 483 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 BAXQ07812 192 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 TMEM268Q5VZI3 342 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 FBXW9Q5XUX1 488 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 SLC26A10Q8NG04 563 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 ZNF436Q9C0F3 470 aaPredicted RBP12.09□□□□□ -0.47
SMC6-201ENST00000351948 PLK3Q9H4B4 646 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 TMEM38BQ9NVV0 291 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 THADAQ6YHU6 1953 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 MGAMO43451 1857 aa12.09□□□□□ -0.47
SMC6-201ENST00000351948 IGHV3-43A0A0B4J1X8 118 aa12.08□□□□□ -0.47
SMC6-201ENST00000351948 IGKV3-11P04433 115 aa12.08□□□□□ -0.47
SMC6-201ENST00000351948 ASAH2BP0C7U1 165 aa12.08□□□□□ -0.47
SMC6-201ENST00000351948 IGHV3-43DP0DP04 118 aa12.08□□□□□ -0.47
SMC6-201ENST00000351948 NME2P22392 152 aa12.08□□□□□ -0.47
SMC6-201ENST00000351948 TMEM211Q6ICI0 200 aa12.08□□□□□ -0.47
SMC6-201ENST00000351948 FAM58AQ8N1B3 248 aa12.08□□□□□ -0.47
SMC6-201ENST00000351948 PBDC1Q9BVG4 233 aa12.08□□□□□ -0.47
SMC6-201ENST00000351948 MAGT1Q9H0U3 335 aa12.08□□□□□ -0.47
SMC6-201ENST00000351948 MED6O75586 246 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 APOA2P02652 100 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 GNG10P50151 68 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 KCNJ8Q15842 424 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 LINC00303Q3SY05 128 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 SP6Q3SY56 376 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 DMKNQ6E0U4 476 aaPredicted RBP12.08□□□□□ -0.48
SMC6-201ENST00000351948 A0A1W2PRD5 423 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 A0A1W2PRF3 423 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 A0A1W2PRM7 423 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 F8W036 122 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 CDIPTO14735 213 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 AQP8O94778 261 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 RFPL3SP0C7P2 107 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 SERPINF1P36955 418 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 PIGPP57054 158 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 BLOC1S1P78537 153 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 MRPS34P82930 218 aaKnown RBP12.08□□□□□ -0.48
SMC6-201ENST00000351948 MDP1Q86V88 176 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 SLC35G3Q8N808 338 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 HPSE2Q8WWQ2 592 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 AKIP1Q9NQ31 210 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 FBXO7Q9Y3I1 522 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 TO15178 435 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 TSPAN9O75954 239 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 MT-CO2P00403 227 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 SMIM4Q8WVI0 70 aa12.08□□□□□ -0.48
SMC6-201ENST00000351948 ZC3H10Q96K80 434 aaKnown RBP12.08□□□□□ -0.48
SMC6-201ENST00000351948 ZNF354AO60765 605 aaPredicted RBP12.07□□□□□ -0.48
SMC6-201ENST00000351948 SNTB1Q13884 538 aaKnown RBP12.07□□□□□ -0.48
SMC6-201ENST00000351948 SIGLEC12Q96PQ1 595 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 TRAV8-7A0A075B6U6 113 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 NGFP01138 241 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 CELA3AP09093 270 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 SRPXP78539 464 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 OPCMLQ14982 345 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 PLA1AQ53H76 456 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 Q6ZNX1 250 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 TMEM200AQ86VY9 491 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 GVQW1Q8N7I0 195 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 RTN4IP1Q8WWV3 396 aaPredicted RBP12.07□□□□□ -0.48
SMC6-201ENST00000351948 UPRTQ96BW1 309 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 MSI2Q96DH6 328 aaKnown RBP12.07□□□□□ -0.48
SMC6-201ENST00000351948 OPA3Q9H6K4 179 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 CYSLTR2Q9NS75 346 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 MUC6Q6W4X9 2439 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 A0A0A6YYJ9 748 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 CTXN2P0C2S0 81 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 LSM6P62312 80 aaKnown RBP12.07□□□□□ -0.48
SMC6-201ENST00000351948 CFHR1Q03591 330 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 ZNF816Q0VGE8 651 aaPredicted RBP12.07□□□□□ -0.48
SMC6-201ENST00000351948 DRAXINQ8NBI3 349 aaPredicted RBP12.07□□□□□ -0.48
SMC6-201ENST00000351948 HIPK2Q9H2X6 1198 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 CD3EP07766 207 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 GABRB1P18505 474 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 KITLGP21583 273 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 ZNF770Q6IQ21 691 aaPredicted RBP12.07□□□□□ -0.48
SMC6-201ENST00000351948 FAM213BQ8TBF2 198 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 SCNM1Q9BWG6 230 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 PRSS50Q9UI38 385 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 FNDC1Q4ZHG4 1894 aaPredicted RBP12.07□□□□□ -0.48
SMC6-201ENST00000351948 SPNP16150 400 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 ZNF17P17021 662 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 PTBP1P26599 531 aaKnown RBP eCLIP12.07□□□□□ -0.481e-9■■■■□ 23.2
SMC6-201ENST00000351948 ZNF767PQ75MW2 155 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 HAS2Q92819 552 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 GALMQ96C23 342 aa12.07□□□□□ -0.48
SMC6-201ENST00000351948 AMELYQ99218 206 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms