RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 EMG1Q92979 244 aaKnown RBP19.31■□□□□ 0.68
UPF3A-201ENST00000351487 ADGRG7Q96K78 797 aa19.31■□□□□ 0.68
UPF3A-201ENST00000351487 FIGNL2A6NMB9 653 aa19.31■□□□□ 0.68
UPF3A-201ENST00000351487 SDCBPO00560 298 aaPredicted RBP19.31■□□□□ 0.68
UPF3A-201ENST00000351487 PGAM2P15259 253 aa19.31■□□□□ 0.68
UPF3A-201ENST00000351487 HGFACQ04756 655 aa19.31■□□□□ 0.68
UPF3A-201ENST00000351487 ANKRD55Q3KP44 614 aa19.31■□□□□ 0.68
UPF3A-201ENST00000351487 CHRFAM7AQ494W8 412 aa19.31■□□□□ 0.68
UPF3A-201ENST00000351487 DCUN1D4Q92564 292 aa19.31■□□□□ 0.68
UPF3A-201ENST00000351487 PIK3IP1Q96FE7 263 aa19.31■□□□□ 0.68
UPF3A-201ENST00000351487 CPNE2Q96FN4 548 aaPredicted RBP19.31■□□□□ 0.68
UPF3A-201ENST00000351487 ELL3Q9HB65 397 aaPredicted RBP19.31■□□□□ 0.68
UPF3A-201ENST00000351487 PRDM6Q9NQX0 595 aa19.31■□□□□ 0.68
UPF3A-201ENST00000351487 GPR173Q9NS66 373 aa19.31■□□□□ 0.68
UPF3A-201ENST00000351487 OR6C6A6NF89 314 aa19.3■□□□□ 0.68
UPF3A-201ENST00000351487 RRP8O43159 456 aaKnown RBP19.3■□□□□ 0.68
UPF3A-201ENST00000351487 RPS18P62269 152 aaKnown RBP19.3■□□□□ 0.68
UPF3A-201ENST00000351487 PPIAP62937 165 aaKnown RBP19.3■□□□□ 0.68
UPF3A-201ENST00000351487 RSPO4Q2I0M5 234 aaPredicted RBP19.3■□□□□ 0.68
UPF3A-201ENST00000351487 DCAF12Q5T6F0 453 aa19.3■□□□□ 0.68
UPF3A-201ENST00000351487 ZNF774Q6NX45 483 aa19.3■□□□□ 0.68
UPF3A-201ENST00000351487 OR2AE1Q8NHA4 323 aa19.3■□□□□ 0.68
UPF3A-201ENST00000351487 ZNF775Q96BV0 537 aaPredicted RBP19.3■□□□□ 0.68
UPF3A-201ENST00000351487 REEP6Q96HR9 211 aa19.3■□□□□ 0.68
UPF3A-201ENST00000351487 MCTS1Q9ULC4 181 aaKnown RBP19.3■□□□□ 0.68
UPF3A-201ENST00000351487 ADAP1O75689 374 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 ACP1P24666 158 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 OTX2P32243 289 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 ECI1P42126 302 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 MTCP1P56278 107 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 PLXDC2Q6UX71 529 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 C6orf201Q7Z4U5 140 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 MAFIPQ8WZ33 124 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 PADI1Q9ULC6 663 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 MRPS18CQ9Y3D5 142 aaKnown RBP19.29■□□□□ 0.68
UPF3A-201ENST00000351487 CNTRLQ7Z7A1 2325 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 H0YIZ8 118 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 NAAAQ02083 359 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 CNN3Q15417 329 aaKnown RBP19.29■□□□□ 0.68
UPF3A-201ENST00000351487 RIPPLY2Q5TAB7 128 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 AAED1Q7RTV5 226 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 STPG2Q8N412 459 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 CFAP54Q96N23 3096 aa19.29■□□□□ 0.68
UPF3A-201ENST00000351487 ALKBH3Q96Q83 286 aaPredicted RBP19.29■□□□□ 0.68
UPF3A-201ENST00000351487 CXCL13O43927 109 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 RFPL3SP0C7P2 107 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 TMEM225BP0DP42 221 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 PRKACBP22694 351 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 ZSCAN4Q8NAM6 433 aaPredicted RBP19.28■□□□□ 0.68
UPF3A-201ENST00000351487 OR2V1Q8NHB1 315 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 METTL9Q9H1A3 318 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 ZNF701Q9NV72 531 aaPredicted RBP19.28■□□□□ 0.68
UPF3A-201ENST00000351487 PLEKHJ1Q9NW61 149 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 ZNF391Q9UJN7 358 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 SERPINA5P05154 406 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 ZNF32P17041 273 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 GLRA1P23415 457 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 GABRR1P24046 479 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 ACER2Q5QJU3 275 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 TMEM42Q69YG0 159 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 PRSS54Q6PEW0 395 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 TFAP2EQ6VUC0 442 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 OR10D3Q8NH80 312 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 ROBO4Q8WZ75 1007 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 RRNAD1Q96FB5 475 aaKnown RBP19.28■□□□□ 0.68
UPF3A-201ENST00000351487 HSF4Q9ULV5 492 aa19.28■□□□□ 0.68
UPF3A-201ENST00000351487 PCSK5Q92824 1860 aa19.27■□□□□ 0.68
UPF3A-201ENST00000351487 IGKV1D-8A0A087WSZ0 117 aa19.27■□□□□ 0.68
UPF3A-201ENST00000351487 B4GALT1P15291 398 aa19.27■□□□□ 0.68
UPF3A-201ENST00000351487 PLEKHN1Q494U1 663 aaPredicted RBP19.27■□□□□ 0.68
UPF3A-201ENST00000351487 ASCL4Q6XD76 172 aa19.27■□□□□ 0.68
UPF3A-201ENST00000351487 ESX1Q8N693 406 aa19.27■□□□□ 0.68
UPF3A-201ENST00000351487 SLC30A7Q8NEW0 376 aa19.27■□□□□ 0.68
UPF3A-201ENST00000351487 FOXB1Q99853 325 aa19.27■□□□□ 0.68
UPF3A-201ENST00000351487 FAM117AQ9C073 453 aa19.27■□□□□ 0.68
UPF3A-201ENST00000351487 PRR13Q9NZ81 148 aa19.27■□□□□ 0.68
UPF3A-201ENST00000351487 EDARQ9UNE0 448 aa19.27■□□□□ 0.68
UPF3A-201ENST00000351487 MPTX1A8MV57 137 aa19.27■□□□□ 0.67
UPF3A-201ENST00000351487 TPT1P13693 172 aaKnown RBP19.27■□□□□ 0.67
UPF3A-201ENST00000351487 IL15RAQ13261 267 aa19.27■□□□□ 0.67
UPF3A-201ENST00000351487 SSPNQ14714 243 aa19.27■□□□□ 0.67
UPF3A-201ENST00000351487 RPUSD3Q6P087 351 aaKnown RBP19.27■□□□□ 0.67
UPF3A-201ENST00000351487 UNQ6126/PRO20091Q6UXV3 157 aa19.27■□□□□ 0.67
UPF3A-201ENST00000351487 C1orf210Q8IVY1 113 aa19.27■□□□□ 0.67
UPF3A-201ENST00000351487 ZNF100Q8IYN0 542 aa19.27■□□□□ 0.67
UPF3A-201ENST00000351487 SPERTQ8NA61 448 aa19.27■□□□□ 0.67
UPF3A-201ENST00000351487 C2orf50Q96LR7 162 aa19.27■□□□□ 0.67
UPF3A-201ENST00000351487 GUCD1Q96NT3 240 aa19.27■□□□□ 0.67
UPF3A-201ENST00000351487 DEPPQ9NTK1 212 aa19.27■□□□□ 0.67
UPF3A-201ENST00000351487 DECR2Q9NUI1 292 aa19.27■□□□□ 0.67
UPF3A-201ENST00000351487 C14orf166Q9Y224 244 aaKnown RBP19.27■□□□□ 0.67
UPF3A-201ENST00000351487 WDFY3Q8IZQ1 3526 aa19.26■□□□□ 0.67
UPF3A-201ENST00000351487 IGKV1-27A0A075B6S5 117 aa19.26■□□□□ 0.67
UPF3A-201ENST00000351487 KCNAB3O43448 404 aa19.26■□□□□ 0.67
UPF3A-201ENST00000351487 LCATP04180 440 aa19.26■□□□□ 0.67
UPF3A-201ENST00000351487 TCN2P20062 427 aa19.26■□□□□ 0.67
UPF3A-201ENST00000351487 RGS19P49795 217 aa19.26■□□□□ 0.67
UPF3A-201ENST00000351487 ELP2Q6IA86 826 aa19.26■□□□□ 0.67
UPF3A-201ENST00000351487 POC1AQ8NBT0 407 aa19.26■□□□□ 0.67
UPF3A-201ENST00000351487 CT55Q8WUE5 264 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms