RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CDONQ4KMG0 1287 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 WDR38Q5JTN6 314 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 METTL11BQ5VVY1 283 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 ZNF841Q6ZN19 808 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 ZFAND2BQ8WV99 257 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 CYGBQ8WWM9 190 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 CCL13Q99616 98 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 GPR173Q9NS66 373 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 NLKQ9UBE8 527 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 CTSZQ9UBR2 303 aa13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 EXOGQ9Y2C4 368 aaKnown RBP13.12□□□□□ -0.31
TSPAN4-201ENST00000346501 A0A1B0GTI1 187 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 E9PQ18 207 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 J3QT63 122 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 ZNF20P17024 532 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 GABRA2P47869 451 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 BPIFB3P59826 476 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 IL13RA1P78552 427 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 GALEQ14376 348 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 CNN3Q15417 329 aaKnown RBP13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 SMIM21Q3B7S5 101 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 GPR157Q5UAW9 335 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 LPCAT4Q643R3 524 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 BTN2A1Q7KYR7 527 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 CMTM4Q8IZR5 234 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 DHRSXQ8N5I4 330 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 OR2G2Q8NGZ5 317 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 PP6455Q8WZ26 134 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 AQP3Q92482 292 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 UPRTQ96BW1 309 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 LGALS12Q96DT0 336 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 ALG8Q9BVK2 526 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 SNTG1Q9NSN8 517 aa13.11□□□□□ -0.31
TSPAN4-201ENST00000346501 LOC107986453A0A1B0GWG9 222 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 FAM230AA0A1W2PPH8 454 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 OR2AT4A6NND4 320 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 ZNF879B4DU55 563 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 TNFRSF13BO14836 293 aaPredicted RBP13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 RGS9O75916 674 aaPredicted RBP13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 TOX4O94842 621 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 CYB5AP00167 134 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 CCR9P51686 369 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 FUT6P51993 359 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 OR12D2P58182 307 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 HILS1P60008 231 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 FGF12P61328 243 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 HOXA4Q00056 320 aaPredicted RBP13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 PAX2Q02962 417 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 IKZF1Q13422 519 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 KRTAP24-1Q3LI83 254 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 ATPAF1Q5TC12 328 aaPredicted RBP13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 TMEM42Q69YG0 159 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 Q6ZSR3 168 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 LHFPL3Q86UP9 236 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 SYS1Q8N2H4 156 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 ZNF676Q8N7Q3 588 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 OR5T2Q8NGG2 359 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 H1FXQ92522 213 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 BORCS8Q96FH0 119 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 C4orf36Q96KX1 117 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 DMRTB1Q96MA1 342 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 SLC6A7Q99884 636 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 PCGF1Q9BSM1 259 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 C19orf24Q9BVV8 132 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 COMMD4Q9H0A8 199 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 RASSF4Q9H2L5 321 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 AMBNQ9NP70 447 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 CHCHD3Q9NX63 227 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 HHLA2Q9UM44 414 aa13.1□□□□□ -0.31
TSPAN4-201ENST00000346501 TRAV40A0A0B4J280 105 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 A6NIN4 97 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 C22orf46C9J442 243 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 H3BSH0 61 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 RHBDL1O75783 438 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 NXPH2O95156 264 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 FSHBP01225 129 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 CCDC159P0C7I6 412 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 GABRB1P18505 474 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 CAPZA1P52907 286 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 GBX2P52951 348 aaPredicted RBP13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 ISL1P61371 349 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 GABPB1Q06547 395 aaPredicted RBP13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 PDCD1Q15116 288 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 DMRTC1Q5HYR2 192 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 STUMQ69YW2 141 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 FDX2Q6P4F2 183 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 TMPRSS11AQ6ZMR5 421 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 PHC2Q8IXK0 858 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 POC1AQ8NBT0 407 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 TRMT10AQ8TBZ6 339 aaKnown RBP13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 C22orf15Q8WYQ4 148 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 WDR13Q9H1Z4 485 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 CNTD2Q9H8S5 307 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 SMURF1Q9HCE7 757 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 SLC25A10Q9UBX3 287 aaPredicted RBP13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 AASSQ9UDR5 926 aa13.09□□□□□ -0.31
TSPAN4-201ENST00000346501 PQLC2LA1A4F0 135 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 J3QRE1 110 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 SLC1A7O00341 560 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms