RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 OC90Q02509 493 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-202ENST00000343599 RNASE12Q5GAN4 147 aaKnown RBP6.39□□□□□ -1.39
ZNF540-202ENST00000343599 APOOLQ6UXV4 268 aa6.39□□□□□ -1.39
ZNF540-202ENST00000343599 OR52B6Q8NGF0 335 aa6.39□□□□□ -1.39
ZNF540-202ENST00000343599 SFXN5Q8TD22 340 aa6.39□□□□□ -1.39
ZNF540-202ENST00000343599 ALKBH3Q96Q83 286 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-202ENST00000343599 DIRC2Q96SL1 478 aa6.39□□□□□ -1.39
ZNF540-202ENST00000343599 RBM24Q9BX46 236 aaKnown RBP6.39□□□□□ -1.39
ZNF540-202ENST00000343599 AUNIPQ9H7T9 357 aa6.39□□□□□ -1.39
ZNF540-202ENST00000343599 KCNE5Q9UJ90 142 aa6.39□□□□□ -1.39
ZNF540-202ENST00000343599 CES1P1Q9UKY3 287 aa6.39□□□□□ -1.39
ZNF540-202ENST00000343599 MED13Q9UHV7 2174 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 TRBV11-1A0A0K0K1C0 115 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 ANKRD20A5PA0PJZ0 165 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 TCF21O43680 179 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 HIST1H2BKO60814 126 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 GCM2O75603 506 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-202ENST00000343599 ADAP1O75689 374 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 HIST1H2BJP06899 126 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 FCGR3AP08637 254 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 HIST1H2BOP23527 126 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 HIST1H2BBP33778 126 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 ZNF84P51523 738 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 HIST1H2BDP58876 126 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 ERVFC1-1P60608 527 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 RPS16P62249 146 aaKnown RBP6.38□□□□□ -1.39
ZNF540-202ENST00000343599 HIST1H2BCP62807 126 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 HIST2H2BEQ16778 126 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 ZNF672Q499Z4 452 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-202ENST00000343599 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-202ENST00000343599 TIMM23BQ5SRD1 257 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 LEMD1Q68G75 181 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 TMEM64Q6YI46 380 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 BCDIN3DQ7Z5W3 292 aaKnown RBP6.38□□□□□ -1.39
ZNF540-202ENST00000343599 FAM185AQ8N0U4 392 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 ZFP41Q8N8Y5 198 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 SEMA6DQ8NFY4 1073 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 OR5AP2Q8NGF4 316 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 GPR148Q8TDV2 347 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 HIST1H2BHQ93079 126 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 HIST1H2BNQ99877 126 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 HIST1H2BMQ99879 126 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 URM1Q9BTM9 101 aaKnown RBP6.38□□□□□ -1.39
ZNF540-202ENST00000343599 LPAR2Q9HBW0 351 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 SLC13A4Q9UKG4 626 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 SMCO3A2RU48 225 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 PRAMEF25A6NGN4 478 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 NKX6-3A6NJ46 265 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 SIAH2O43255 324 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 FABP4P15090 132 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 CSNK2A2P19784 350 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-202ENST00000343599 SULT1A1P50225 295 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 BDH1Q02338 343 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 IFI44LQ53G44 452 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 KPRPQ5T749 579 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-202ENST00000343599 GFI1BQ5VTD9 330 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 C11orf87Q6NUJ2 197 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 SMARCD3Q6STE5 483 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 GOLGA7Q7Z5G4 137 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 GLB1L2Q8IW92 636 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 SLC30A8Q8IWU4 369 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 MUC20Q8N307 709 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-202ENST00000343599 C10orf53Q8N6V4 93 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 TCEANCQ8N8B7 351 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 OR13D1Q8NGV5 346 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 ADAMTS15Q8TE58 950 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 FN3KRPQ9HA64 309 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 TPT1P8Q9HAU6 139 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 GPR173Q9NS66 373 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 IL20RAQ9UHF4 553 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 FBXL7Q9UJT9 491 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 HDGFL3Q9Y3E1 203 aa6.38□□□□□ -1.39
ZNF540-202ENST00000343599 SNRNP200O75643 2136 aaKnown RBP6.37□□□□□ -1.39
ZNF540-202ENST00000343599 ANKRD61A6NGH8 418 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 C9JQL5 133 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 C16orf97H3BN30 126 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 GABARAPH6UMI1 98 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 IL6RP08887 468 aaPredicted RBP6.37□□□□□ -1.39
ZNF540-202ENST00000343599 PVRP15151 417 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 TACR1P25103 407 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 IFNGR2P38484 337 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 FEN1P39748 380 aaKnown RBP6.37□□□□□ -1.39
ZNF540-202ENST00000343599 SELENOTP62341 195 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 GTF2H2Q13888 395 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 LY6G6FQ5SQ64 297 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 NCR3LG1Q68D85 454 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 EIF5AL1Q6IS14 154 aaKnown RBP6.37□□□□□ -1.39
ZNF540-202ENST00000343599 GTF2H2CQ6P1K8 395 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 ESPNLQ6ZVH7 1005 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 C1QL2Q7Z5L3 287 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 LDB1Q86U70 411 aaPredicted RBP6.37□□□□□ -1.39
ZNF540-202ENST00000343599 VRK2Q86Y07 508 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 FOXRED2Q8IWF2 684 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 PAQR4Q8N4S7 273 aaPredicted RBP6.37□□□□□ -1.39
ZNF540-202ENST00000343599 LKAAEAR1Q8TD35 194 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 TMEM171Q8WVE6 324 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 PIK3IP1Q96FE7 263 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 CDK15Q96Q40 435 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 HIST1H2BLQ99880 126 aa6.37□□□□□ -1.39
ZNF540-202ENST00000343599 PCGF1Q9BSM1 259 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms