RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 OR52W1Q6IF63 320 aa17.24■□□□□ 0.35
RTN1-202ENST00000342503 GLDNQ6ZMI3 551 aaPredicted RBP17.24■□□□□ 0.35
RTN1-202ENST00000342503 RFPL4BQ6ZWI9 263 aa17.24■□□□□ 0.35
RTN1-202ENST00000342503 OR11H7Q8NGC8 314 aa17.24■□□□□ 0.35
RTN1-202ENST00000342503 SEC22CQ9BRL7 303 aa17.24■□□□□ 0.35
RTN1-202ENST00000342503 PAPOLGQ9BWT3 736 aaKnown RBP17.24■□□□□ 0.35
RTN1-202ENST00000342503 PECRQ9BY49 303 aa17.24■□□□□ 0.35
RTN1-202ENST00000342503 OPA3Q9H6K4 179 aa17.24■□□□□ 0.35
RTN1-202ENST00000342503 MSRB2Q9Y3D2 182 aa17.24■□□□□ 0.35
RTN1-202ENST00000342503 IGKV1-12A0A0C4DH73 117 aa17.23■□□□□ 0.35
RTN1-202ENST00000342503 MBD3L4A6NDZ8 208 aaPredicted RBP17.23■□□□□ 0.35
RTN1-202ENST00000342503 MBD3L3A6NE82 208 aaPredicted RBP17.23■□□□□ 0.35
RTN1-202ENST00000342503 MBD3L5A6NJ08 208 aaPredicted RBP17.23■□□□□ 0.35
RTN1-202ENST00000342503 SSNA1O43805 119 aa17.23■□□□□ 0.35
RTN1-202ENST00000342503 TNFSF13O75888 250 aa17.23■□□□□ 0.35
RTN1-202ENST00000342503 CST4P01036 141 aa17.23■□□□□ 0.35
RTN1-202ENST00000342503 IGKV1D-12P01611 117 aa17.23■□□□□ 0.35
RTN1-202ENST00000342503 CSTBP04080 98 aaKnown RBP17.23■□□□□ 0.35
RTN1-202ENST00000342503 COX5AP20674 150 aa17.23■□□□□ 0.35
RTN1-202ENST00000342503 PER3P56645 1201 aa17.23■□□□□ 0.35
RTN1-202ENST00000342503 PDZK1IP1Q13113 114 aa17.23■□□□□ 0.35
RTN1-202ENST00000342503 MAB21L1Q13394 359 aa17.23■□□□□ 0.35
RTN1-202ENST00000342503 RTL6Q6ICC9 239 aa17.23■□□□□ 0.35
RTN1-202ENST00000342503 BPIFB2Q8N4F0 458 aa17.23■□□□□ 0.35
RTN1-202ENST00000342503 ZBTB8BQ8NAP8 495 aaPredicted RBP17.23■□□□□ 0.35
RTN1-202ENST00000342503 NAXEQ8NCW5 288 aa17.23■□□□□ 0.35
RTN1-202ENST00000342503 CSNK2A3Q8NEV1 391 aa17.23■□□□□ 0.35
RTN1-202ENST00000342503 MBD3L2Q8NHZ7 208 aaPredicted RBP17.23■□□□□ 0.35
RTN1-202ENST00000342503 Q96M66 194 aa17.23■□□□□ 0.35
RTN1-202ENST00000342503 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.23■□□□□ 0.35
RTN1-202ENST00000342503 SPENQ96T58 3664 aaKnown RBP17.22■□□□□ 0.35
RTN1-202ENST00000342503 CUL9Q8IWT3 2517 aa17.22■□□□□ 0.35
RTN1-202ENST00000342503 IL5P05113 134 aa17.22■□□□□ 0.35
RTN1-202ENST00000342503 TPOP07202 933 aa17.22■□□□□ 0.35
RTN1-202ENST00000342503 GABRR1P24046 479 aa17.22■□□□□ 0.35
RTN1-202ENST00000342503 MEF2DQ14814 521 aa17.22■□□□□ 0.35
RTN1-202ENST00000342503 SF3B4Q15427 424 aaKnown RBP eCLIP17.22■□□□□ 0.35
RTN1-202ENST00000342503 INO80CQ6PI98 192 aaPredicted RBP17.22■□□□□ 0.35
RTN1-202ENST00000342503 IDO2Q6ZQW0 420 aa17.22■□□□□ 0.35
RTN1-202ENST00000342503 PXT1Q8NFP0 134 aa17.22■□□□□ 0.35
RTN1-202ENST00000342503 OR5L1Q8NGL2 311 aa17.22■□□□□ 0.35
RTN1-202ENST00000342503 STARD4Q96DR4 205 aa17.22■□□□□ 0.35
RTN1-202ENST00000342503 SLC6A7Q99884 636 aa17.22■□□□□ 0.35
RTN1-202ENST00000342503 FGF23Q9GZV9 251 aaPredicted RBP17.22■□□□□ 0.35
RTN1-202ENST00000342503 EIF3KQ9UBQ5 218 aaKnown RBP17.22■□□□□ 0.35
RTN1-202ENST00000342503 ANAPC10Q9UM13 185 aa17.22■□□□□ 0.35
RTN1-202ENST00000342503 PROCRQ9UNN8 238 aa17.22■□□□□ 0.35
RTN1-202ENST00000342503 TP53TG5Q9Y2B4 290 aa17.22■□□□□ 0.35
RTN1-202ENST00000342503 DISC1C4P0D8 188 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 RLN1P04808 185 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 CSN2P05814 226 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 VSIG10L2P0DP72 767 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 HOXB1P14653 301 aaPredicted RBP17.21■□□□□ 0.35
RTN1-202ENST00000342503 IDH3GP51553 393 aaPredicted RBP17.21■□□□□ 0.35
RTN1-202ENST00000342503 ARFRP1Q13795 201 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 TBR1Q16650 682 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 RNASE10Q5GAN6 216 aaKnown RBP17.21■□□□□ 0.35
RTN1-202ENST00000342503 SLC36A1Q7Z2H8 476 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 NOXA1Q86UR1 476 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 CD163Q86VB7 1156 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 ZDHHC23Q8IYP9 409 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 ZNF610Q8N9Z0 462 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 ZNF486Q96H40 463 aaPredicted RBP17.21■□□□□ 0.35
RTN1-202ENST00000342503 OPN3Q9H1Y3 402 aaPredicted RBP17.21■□□□□ 0.35
RTN1-202ENST00000342503 MOV10Q9HCE1 1003 aaKnown RBP17.21■□□□□ 0.35
RTN1-202ENST00000342503 PQLC2LA1A4F0 135 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 CD300LBA8K4G0 201 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 ZNF780AO75290 641 aaPredicted RBP17.21■□□□□ 0.35
RTN1-202ENST00000342503 TOXO94900 526 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 CGAP01215 116 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 SULT1A3P0DMM9 295 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 SULT1A4P0DMN0 295 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 NAT1P18440 290 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 CXCL3P19876 107 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 NKPD1Q17RQ9 610 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 CALHM1Q8IU99 346 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 WDR31Q8NA23 367 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 C1orf162Q8NEQ5 155 aaPredicted RBP17.21■□□□□ 0.35
RTN1-202ENST00000342503 HPSE2Q8WWQ2 592 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 ST8SIA4Q92187 359 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 SNAPC3Q92966 411 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 MED30Q96HR3 178 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 CDH20Q9HBT6 801 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 IL36GQ9NZH8 169 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 ZNF629Q9UEG4 869 aaPredicted RBP17.21■□□□□ 0.35
RTN1-202ENST00000342503 SCP2D1Q9UJQ7 156 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 ZNF222Q9UK12 451 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 FAM215AQ9Y5M1 114 aa17.21■□□□□ 0.35
RTN1-202ENST00000342503 SMLR1H3BR10 107 aa17.2■□□□□ 0.34
RTN1-202ENST00000342503 K7ENP7 123 aa17.2■□□□□ 0.34
RTN1-202ENST00000342503 WDR1O75083 606 aa17.2■□□□□ 0.34
RTN1-202ENST00000342503 HRH1P35367 487 aa17.2■□□□□ 0.34
RTN1-202ENST00000342503 CEACAM21Q3KPI0 293 aa17.2■□□□□ 0.34
RTN1-202ENST00000342503 SCGB2B2Q4G0G5 96 aa17.2■□□□□ 0.34
RTN1-202ENST00000342503 C1orf185Q5T7R7 199 aa17.2■□□□□ 0.34
RTN1-202ENST00000342503 FAM180AQ6UWF9 173 aa17.2■□□□□ 0.34
RTN1-202ENST00000342503 CXorf67Q86X51 503 aaPredicted RBP17.2■□□□□ 0.34
RTN1-202ENST00000342503 OR51F2Q8NH61 342 aa17.2■□□□□ 0.34
RTN1-202ENST00000342503 BOD1Q96IK1 185 aa17.2■□□□□ 0.34
RTN1-202ENST00000342503 OCSTAMPQ9BR26 566 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms