RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 LINC00052Q96N35 136 aa12.52□□□□□ -0.41
PDE4D-203ENST00000340635 TEAD3Q99594 435 aa12.52□□□□□ -0.41
PDE4D-203ENST00000340635 SH2D2AQ9NP31 389 aa12.52□□□□□ -0.41
PDE4D-203ENST00000340635 PPIL1Q9Y3C6 166 aa12.52□□□□□ -0.41
PDE4D-203ENST00000340635 OR4A8P0C604 315 aa12.52□□□□□ -0.41
PDE4D-203ENST00000340635 TIAL1Q01085 375 aaKnown RBP eCLIP12.52□□□□□ -0.41
PDE4D-203ENST00000340635 FAM78AQ5JUQ0 283 aa12.52□□□□□ -0.41
PDE4D-203ENST00000340635 NANOGP1Q8N7R0 232 aa12.52□□□□□ -0.41
PDE4D-203ENST00000340635 PLPPR2Q96GM1 343 aa12.52□□□□□ -0.41
PDE4D-203ENST00000340635 PRR14Q9BWN1 585 aa12.52□□□□□ -0.41
PDE4D-203ENST00000340635 GPR61Q9BZJ8 451 aa12.52□□□□□ -0.41
PDE4D-203ENST00000340635 SLC2A10O95528 541 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 PRSS8Q16651 343 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 BCORP1Q8N888 145 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 TMEM9BQ9NQ34 198 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 MMP26Q9NRE1 261 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 TAAR3PQ9P1P4 343 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 FCGR3BO75015 233 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 TSPAN12O95859 305 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 B4GALT1P15291 398 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 CLDN15P56746 228 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 FBXO46Q6PJ61 603 aaPredicted RBP12.51□□□□□ -0.41
PDE4D-203ENST00000340635 Q8IYB0 196 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 TREX1Q9NSU2 369 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 TNFRSF10CO14798 259 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 SPRY1O43609 319 aaPredicted RBP12.51□□□□□ -0.41
PDE4D-203ENST00000340635 CRYABP02511 175 aaKnown RBP12.51□□□□□ -0.41
PDE4D-203ENST00000340635 ZNF26P17031 533 aaPredicted RBP12.51□□□□□ -0.41
PDE4D-203ENST00000340635 SLC38A11Q08AI6 406 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 TMEM38AQ9H6F2 299 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 HOXC11O43248 304 aaPredicted RBP12.51□□□□□ -0.41
PDE4D-203ENST00000340635 OR3A4PP47883 348 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 RBM45Q8IUH3 476 aaKnown RBP12.51□□□□□ -0.41
PDE4D-203ENST00000340635 LKAAEAR1Q8TD35 194 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 S1PR5Q9H228 398 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 ZNF683Q8IZ20 524 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 TBX15Q96SF7 602 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 DEFB108AA8MXU0 73 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 HIST1H1BP16401 226 aaKnown RBP12.51□□□□□ -0.41
PDE4D-203ENST00000340635 PDLIM5Q96HC4 596 aaKnown RBP12.51□□□□□ -0.41
PDE4D-203ENST00000340635 ZIC5Q96T25 663 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 ABHD14AQ9BUJ0 271 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 HDAC8Q9BY41 377 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 PCOLCE2Q9UKZ9 415 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 DRGXA6NNA5 263 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 P01737 135 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 COX7A1P24310 79 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 FAM78BQ5VT40 261 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 ZDHHC5Q9C0B5 715 aa12.51□□□□□ -0.41
PDE4D-203ENST00000340635 FAM181BA6NEQ2 426 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 LMO3Q8TAP4 145 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 ZNF502Q8TBZ5 544 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 SLC25A33Q9BSK2 321 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 ZNFX1Q9P2E3 1918 aaKnown RBP12.5□□□□□ -0.41
PDE4D-203ENST00000340635 IGSF23A1L1A6 192 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 TNFSF15O95150 251 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 ZXDAP98168 799 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 SSBP1Q04837 148 aaKnown RBP12.5□□□□□ -0.41
PDE4D-203ENST00000340635 PNLIPRP3Q17RR3 467 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 PERPQ96FX8 193 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 HAPLN2Q9GZV7 340 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 VSIG4Q9Y279 399 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 MYOM1P52179 1685 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 FAM157AC9JC47 383 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 DSCR3O14972 297 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 CSF2RBP32927 897 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 CLDN20P56880 219 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 SIX1Q15475 284 aaPredicted RBP12.5□□□□□ -0.41
PDE4D-203ENST00000340635 RNFT1Q5M7Z0 435 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 TRAT1Q6PIZ9 186 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 RAB1BQ9H0U4 201 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.5□□□□□ -0.41
PDE4D-203ENST00000340635 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.5□□□□□ -0.41
PDE4D-203ENST00000340635 LOC107984156A0A0G2JMH3 177 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 CD3DP04234 171 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 CTSLP07711 333 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 HIST1H1EP10412 219 aaKnown RBP12.5□□□□□ -0.41
PDE4D-203ENST00000340635 LIPAP38571 399 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 ARL17AQ8IVW1 177 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 PHOSPHO2Q8TCD6 241 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 RASL11BQ9BPW5 248 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 F2RL2O00254 374 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 METAP1P53582 386 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 CACNG7P62955 275 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 FZD2Q14332 565 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 ZNF77Q15935 545 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 ZNF740Q8NDX6 193 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 UBTD2Q8WUN7 234 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 SLC46A2Q9BY10 475 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 OR2D2Q9H210 308 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 ELFN2Q5R3F8 820 aa12.5□□□□□ -0.41
PDE4D-203ENST00000340635 HSPB2A8KAH6 182 aa12.49□□□□□ -0.41
PDE4D-203ENST00000340635 LANCL1O43813 399 aa12.49□□□□□ -0.41
PDE4D-203ENST00000340635 ID1P41134 155 aa12.49□□□□□ -0.41
PDE4D-203ENST00000340635 HSPB2Q16082 182 aa12.49□□□□□ -0.41
PDE4D-203ENST00000340635 OR2G2Q8NGZ5 317 aa12.49□□□□□ -0.41
PDE4D-203ENST00000340635 PPP6CO00743 305 aa12.49□□□□□ -0.41
PDE4D-203ENST00000340635 CBR3O75828 277 aa12.49□□□□□ -0.41
PDE4D-203ENST00000340635 SPINK9Q5DT21 86 aa12.49□□□□□ -0.41
PDE4D-203ENST00000340635 OR5M9Q8NGP3 310 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms