RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 MED12LQ86YW9 2145 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 C7orf66A4D0T2 115 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 GEMIN2O14893 280 aaKnown RBP8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 APOC1P02654 83 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 GABRA1P14867 456 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 RBP2P50120 134 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 C1orf100Q5SVJ3 147 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 FAM166AQ6J272 317 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 ADGRG7Q96K78 797 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 SYNGR3O43761 229 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 TPOP07202 933 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 HIST1H1DP16402 221 aaKnown RBP8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 APLNRP35414 380 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 GRK1Q15835 563 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 MICBQ29980 383 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 ZNF260Q3ZCT1 412 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 ATPAF1Q5TC12 328 aaPredicted RBP8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 DRAM2Q6UX65 266 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 C12orf45Q8N5I9 185 aaPredicted RBP8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 BOLLQ8N9W6 283 aaKnown RBP8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 GALNT11Q8NCW6 608 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 ADAMTS17Q8TE56 1095 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 HIST1H2AAQ96QV6 131 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 RABL2BQ9UNT1 228 aa8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 TMA7Q9Y2S6 64 aaKnown RBP8.85□□□□□ -0.99
RBFOX1-202ENST00000340209 A0A1B0GUH1 482 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 F5H5P2 479 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 M0R233 179 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 NME2P1O60361 137 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 ZNF780AO75290 641 aaPredicted RBP8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 SPDEFO95238 335 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 CELA3BP08861 270 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 NME2P22392 152 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 UBE2NP61088 152 aaKnown RBP8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 PPP1R1AQ13522 171 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 ALKBH6Q3KRA9 238 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 CMTM3Q96MX0 182 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 RANBP3Q9H6Z4 567 aaPredicted RBP8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 CRIM1Q9NZV1 1036 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 VSIG4Q9Y279 399 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 STARD10Q9Y365 291 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 TRAV39A0A0B4J263 110 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 OR2AT4A6NND4 320 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 SCGB1D2O95969 90 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 HPNP05981 417 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 HOXB5P09067 269 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 CST2P09228 141 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 HOXC12P31275 282 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 TMEM50BP56557 158 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 MALLQ13021 153 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 ABLIM2Q6H8Q1 611 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 H3F3CQ6NXT2 135 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 VHLLQ6RSH7 139 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 ALKAL2Q6UX46 152 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 CCDC107Q8WV48 283 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 UQCC2Q9BRT2 126 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 CHST5Q9GZS9 411 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 METTL9Q9H1A3 318 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 ZNF71Q9NQZ8 489 aaPredicted RBP8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 IL36RNQ9UBH0 155 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 ST3GAL6Q9Y274 331 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 OR6C6A6NF89 314 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 SFTPBP07988 381 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 ZNF708P17019 499 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 CSRP1P21291 193 aaKnown RBP8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 THBS4P35443 961 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 S100A10P60903 97 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 HOXA4Q00056 320 aaPredicted RBP8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 FAM109AQ8N4B1 249 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 C17orf78Q8N4C9 275 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 OR2AK2Q8NG84 335 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 COQ8AQ8NI60 647 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 METTL8Q9H825 291 aaKnown RBP8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 COMMD9Q9P000 198 aa8.84□□□□□ -0.99
RBFOX1-202ENST00000340209 SULT1A3P0DMM9 295 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 SULT1A4P0DMN0 295 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 NPBWR2P48146 333 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 H2BFSP57053 126 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 ERVS71-1P61550 626 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 DHRS2Q13268 280 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 CAMK2BQ13554 666 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 CNN3Q15417 329 aaKnown RBP8.83□□□□□ -1
RBFOX1-202ENST00000340209 LAMTOR1Q6IAA8 161 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 HAGHLQ6PII5 290 aaPredicted RBP8.83□□□□□ -1
RBFOX1-202ENST00000340209 C9orf62Q8N4C0 152 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 GPHA2Q96T91 129 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 CMSS1Q9BQ75 279 aaKnown RBP8.83□□□□□ -1
RBFOX1-202ENST00000340209 FANCFQ9NPI8 374 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 RDH8Q9NYR8 311 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 HS3ST1O14792 307 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 BET1O15155 118 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 SSX5O60225 188 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 PRAF2O60831 178 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 CA6P23280 308 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 PHLDA2Q53GA4 152 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 ZNF611Q8N823 705 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 SLC17A5Q9NRA2 495 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 IGKV1-27A0A075B6S5 117 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 MEIKINA0A087WXM9 373 aa8.83□□□□□ -1
RBFOX1-202ENST00000340209 TEX13DA0A0J9YY54 714 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms