RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 NPIPB4C9JG80 1138 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 K7ERQ8 282 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SIGLEC5O15389 551 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 MT-CO1P00395 513 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FZD2Q14332 565 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OPCMLQ14982 345 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OXA1LQ15070 435 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 MOGAT2Q3SYC2 334 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CLEC12AQ5QGZ9 265 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 GLYATL3Q5SZD4 288 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CD300LDQ6UXZ3 194 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CBLL1Q75N03 491 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 KHSRPQ92945 711 aaKnown RBP eCLIP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SMIM19Q96E16 107 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 C7orf34Q96L11 122 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FEVQ99581 238 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 MIEN1Q9BRT3 115 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SLC46A2Q9BY10 475 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SAP30LQ9HAJ7 183 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SLC2A8Q9NY64 477 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CLN8Q9UBY8 286 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SONP18583 2426 aaKnown RBP2.96□□□□□ -1.93
CSMD3-202ENST00000339701 COL4A4P53420 1690 aaPredicted RBP2.96□□□□□ -1.93
CSMD3-202ENST00000339701 CPSF4LA6NMK7 179 aaKnown RBP2.96□□□□□ -1.93
CSMD3-202ENST00000339701 PIRO00625 290 aa2.96□□□□□ -1.93
CSMD3-202ENST00000339701 HPP00738 406 aa2.96□□□□□ -1.93
CSMD3-202ENST00000339701 OR3A1P47881 315 aa2.96□□□□□ -1.93
CSMD3-202ENST00000339701 TAS2R40P59535 323 aa2.96□□□□□ -1.93
CSMD3-202ENST00000339701 LCN2P80188 198 aa2.96□□□□□ -1.93
CSMD3-202ENST00000339701 GGTLC2Q14390 218 aa2.96□□□□□ -1.93
CSMD3-202ENST00000339701 GALNT10Q86SR1 603 aa2.96□□□□□ -1.93
CSMD3-202ENST00000339701 FAM71CQ8NEG0 241 aa2.96□□□□□ -1.93
CSMD3-202ENST00000339701 SYNPRQ8TBG9 265 aa2.96□□□□□ -1.93
CSMD3-202ENST00000339701 FUBP1Q96AE4 644 aaKnown RBP2.96□□□□□ -1.93
CSMD3-202ENST00000339701 MRGPRX3Q96LB0 322 aa2.96□□□□□ -1.93
CSMD3-202ENST00000339701 ONECUT1Q9UBC0 465 aa2.96□□□□□ -1.93
CSMD3-202ENST00000339701 RIMS3Q9UJD0 308 aa2.96□□□□□ -1.93
CSMD3-202ENST00000339701 C7orf71A4D174 169 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 J3QLW9 94 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 WDR1O75083 606 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SORBS2O94875 1100 aaKnown RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 GPR75O95800 540 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OPN1LWP04000 364 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 CTSLP07711 333 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OR13C7P0DN81 318 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF19P17023 458 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 NPY1RP25929 384 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 NMBRP28336 390 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF93P35789 620 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 PNLIPRP2P54317 469 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM267Q0VDI3 215 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SELENBP1Q13228 472 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 FBXO48Q5FWF7 155 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 COL5A1-AS1Q5SY13 56 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 CLEC9AQ6UXN8 241 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 C16orf47Q6ZP98 133 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 MBOAT2Q6ZWT7 520 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OSTM1Q86WC4 334 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 RBMXL3Q8N7X1 1067 aaKnown RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OR2A1Q8NGT9 310 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 ZPLD1Q8TCW7 415 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 C2CD4CQ8TF44 421 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 HGDQ93099 445 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 TP53RKQ96S44 253 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SFXN3Q9BWM7 321 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 HINT2Q9BX68 163 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 RBCK1Q9BYM8 510 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 NTN4Q9HB63 628 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 HES4Q9HCC6 221 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 ATXN7L1Q9ULK2 861 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 KIAA1549Q9HCM3 1950 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 OR2C1O95371 312 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 FGF2P09038 288 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 FAM87AP0C7U9 286 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 RGRP47804 291 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 HOXA1P49639 335 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 HINT1P49773 126 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 FAM189BP81408 668 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SLC5A12Q1EHB4 618 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SLC25A30Q5SVS4 291 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 FAM27D1Q5T7N8 215 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 CCDC144NLQ6NUI1 221 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM107Q6UX40 140 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF836Q6ZNA1 936 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 Q6ZNX1 250 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 ADGRG5Q8IZF4 528 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SLC35G3Q8N808 338 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 LRRC15Q8TF66 581 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SLC25A44Q96H78 314 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 FAM173AQ9BQD7 235 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 DCTN5Q9BTE1 182 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 PPIL3Q9H2H8 161 aaKnown RBP2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SMOC1Q9H4F8 434 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 SLCO1C1Q9NYB5 712 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 KRBA1A5PL33 1030 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 NPIPB6E9PJ23 425 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 CYR61O00622 381 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 B4GALT3O60512 393 aa2.96□□□□□ -1.94
CSMD3-202ENST00000339701 LDB3O75112 727 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms