RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 CCDC54Q8NEL0 328 aa11.29□□□□□ -0.6
CDK5RAP1-201ENST00000339269 OR52H1Q8NGJ2 320 aa11.29□□□□□ -0.6
CDK5RAP1-201ENST00000339269 TERB2Q8NHR7 220 aa11.29□□□□□ -0.6
CDK5RAP1-201ENST00000339269 MAFIPQ8WZ33 124 aa11.29□□□□□ -0.6
CDK5RAP1-201ENST00000339269 TMEM45BQ96B21 275 aa11.29□□□□□ -0.6
CDK5RAP1-201ENST00000339269 REEP6Q96HR9 211 aa11.29□□□□□ -0.6
CDK5RAP1-201ENST00000339269 Q96M66 194 aa11.29□□□□□ -0.6
CDK5RAP1-201ENST00000339269 URM1Q9BTM9 101 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP1-201ENST00000339269 OR2H1Q9GZK4 316 aa11.29□□□□□ -0.6
CDK5RAP1-201ENST00000339269 LRFN1Q9P244 771 aa11.29□□□□□ -0.6
CDK5RAP1-201ENST00000339269 MCTS1Q9ULC4 181 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP1-201ENST00000339269 GPR132Q9UNW8 380 aa11.29□□□□□ -0.6
CDK5RAP1-201ENST00000339269 OSGIN2Q9Y236 505 aa11.29□□□□□ -0.6
CDK5RAP1-201ENST00000339269 SNAPC5O75971 98 aa11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 APOC1P02654 83 aa11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 SLC25A4P12235 298 aa11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 RPS2P15880 293 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 SERPINA2P20848 420 aa11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 CLDN18P56856 261 aa11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 SUPT4H1P63272 117 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 AANATQ16613 207 aa11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 ALKAL2Q6UX46 152 aa11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 SEMA6DQ8NFY4 1073 aa11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 OR6K3Q8NGY3 331 aa11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 SEC22AQ96IW7 307 aa11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 CXorf58Q96LI9 332 aa11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 RTBDNQ9BSG5 229 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 MFFQ9GZY8 342 aa11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 KIF25Q9UIL4 384 aa11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 TNFSF18Q9UNG2 199 aa11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 CEP295Q9C0D2 2601 aa11.28□□□□□ -0.6
CDK5RAP1-201ENST00000339269 CELSR3Q9NYQ7 3312 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 hCG_38984A0A1B0GV85 526 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 MED19A0JLT2 244 aaPredicted RBP11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 RP2O75695 350 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 DUS4LO95620 317 aaKnown RBP11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 EDN3P14138 238 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 C4BPBP20851 252 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 BLVRBP30043 206 aaPredicted RBP11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 DLSTP36957 453 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 NPY4RP50391 375 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 ATP1B3P54709 279 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 SCRN3Q0VDG4 424 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 DAZAP2Q15038 168 aaPredicted RBP11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 ACTBL2Q562R1 376 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 HES3Q5TGS1 186 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 TSPO2Q5TGU0 170 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 RGS7BPQ6MZT1 257 aaPredicted RBP11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 GSG1LQ6UXU4 331 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 ASCL4Q6XD76 172 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 ARRDC1Q8N5I2 433 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 LINC00469Q8N7U9 141 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 PNLDC1Q8NA58 520 aaKnown RBP11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 TMEM185AQ8NFB2 350 aa11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 CPNE4Q96A23 557 aaPredicted RBP11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 HDHD3Q9BSH5 251 aaPredicted RBP11.27□□□□□ -0.6
CDK5RAP1-201ENST00000339269 ASPMQ8IZT6 3477 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 IGKV1-12A0A0C4DH73 117 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 ZNF587BE7ETH6 402 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 SHOXO15266 292 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 ANGPTL7O43827 346 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 CA11O75493 328 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 IGKV1D-12P01611 117 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 AKR1C4P17516 323 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 SPINK2P20155 84 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 HTR5AP47898 357 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 AP2S1P53680 142 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 FOXG1P55316 489 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 IL13RA1P78552 427 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 C11orf87Q6NUJ2 197 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 JMJD6Q6NYC1 403 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 C6orf201Q7Z4U5 140 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 LILRB2Q8N423 598 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 SPERTQ8NA61 448 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 LILRB1Q8NHL6 650 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 PPP1R1CQ8WVI7 109 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 FAM173AQ9BQD7 235 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 C1QTNF6Q9BXI9 259 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 IL17BQ9UHF5 180 aa11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 BOKQ9UMX3 212 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP1-201ENST00000339269 C21orf140B9A014 251 aa11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 SDCBPO00560 298 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 SPRY1O43609 319 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 MT-CO3P00414 261 aa11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 IGHV3-9P01782 118 aa11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 RLN2P04090 185 aa11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 IFNA6P05013 189 aa11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 PI3P19957 117 aa11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 AMY2BP19961 511 aa11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 FPR2P25090 351 aa11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 CBX5P45973 191 aa11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 SNU13P55769 128 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 FAM3AP98173 230 aa11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 ZNF92Q03936 586 aa11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 DCAF10Q5QP82 559 aa11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 ZNF546Q86UE3 836 aa11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 KCNRGQ8N5I3 272 aa11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 CPEB3Q8NE35 698 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 SCARB1Q8WTV0 552 aa11.26□□□□□ -0.61
CDK5RAP1-201ENST00000339269 CASTOR1Q8WTX7 329 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms