RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ICMTO60725 284 aa19.34■□□□□ 0.69
PDLIM2-203ENST00000339162 GABRR1P24046 479 aa19.34■□□□□ 0.69
PDLIM2-203ENST00000339162 BLVRBP30043 206 aaPredicted RBP19.34■□□□□ 0.69
PDLIM2-203ENST00000339162 RSU1Q15404 277 aa19.34■□□□□ 0.69
PDLIM2-203ENST00000339162 NKPD1Q17RQ9 610 aa19.34■□□□□ 0.69
PDLIM2-203ENST00000339162 OR2A2Q6IF42 318 aa19.34■□□□□ 0.69
PDLIM2-203ENST00000339162 ZNF610Q8N9Z0 462 aa19.34■□□□□ 0.69
PDLIM2-203ENST00000339162 IGKV1-12A0A0C4DH73 117 aa19.33■□□□□ 0.69
PDLIM2-203ENST00000339162 IGKV1D-12P01611 117 aa19.33■□□□□ 0.69
PDLIM2-203ENST00000339162 IL32P24001 234 aa19.33■□□□□ 0.69
PDLIM2-203ENST00000339162 FUT6P51993 359 aa19.33■□□□□ 0.69
PDLIM2-203ENST00000339162 GNG2P59768 71 aa19.33■□□□□ 0.69
PDLIM2-203ENST00000339162 DPPA2Q7Z7J5 298 aa19.33■□□□□ 0.69
PDLIM2-203ENST00000339162 CD163Q86VB7 1156 aa19.33■□□□□ 0.69
PDLIM2-203ENST00000339162 CALHM1Q8IU99 346 aa19.33■□□□□ 0.69
PDLIM2-203ENST00000339162 FAM89BQ8N5H3 189 aa19.33■□□□□ 0.69
PDLIM2-203ENST00000339162 WBP1Q96G27 269 aa19.33■□□□□ 0.69
PDLIM2-203ENST00000339162 ZNF581Q9P0T4 197 aa19.33■□□□□ 0.69
PDLIM2-203ENST00000339162 LILRA1O75019 489 aa19.33■□□□□ 0.68
PDLIM2-203ENST00000339162 AGFG2O95081 481 aa19.33■□□□□ 0.68
PDLIM2-203ENST00000339162 AMY2AP04746 511 aa19.33■□□□□ 0.68
PDLIM2-203ENST00000339162 ZNF14P17017 642 aaPredicted RBP19.33■□□□□ 0.68
PDLIM2-203ENST00000339162 RAG2P55895 527 aa19.33■□□□□ 0.68
PDLIM2-203ENST00000339162 PRDX4Q13162 271 aa19.33■□□□□ 0.68
PDLIM2-203ENST00000339162 ZFP69Q49AA0 526 aa19.33■□□□□ 0.68
PDLIM2-203ENST00000339162 CDH24Q86UP0 819 aa19.33■□□□□ 0.68
PDLIM2-203ENST00000339162 STARD4Q96DR4 205 aa19.33■□□□□ 0.68
PDLIM2-203ENST00000339162 NUDT16L1Q9BRJ7 211 aaKnown RBP19.33■□□□□ 0.68
PDLIM2-203ENST00000339162 SEC22CQ9BRL7 303 aa19.33■□□□□ 0.68
PDLIM2-203ENST00000339162 METTL9Q9H1A3 318 aa19.33■□□□□ 0.68
PDLIM2-203ENST00000339162 CRYABP02511 175 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 ATP1B3P54709 279 aa19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 RBMS2Q15434 407 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 TBR1Q16650 682 aa19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 DEDD2Q8WXF8 326 aa19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 CCDC120Q96HB5 630 aa19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 IFT46Q9NQC8 304 aa19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 FAM215AQ9Y5M1 114 aa19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 PRR14LQ5THK1 2151 aa19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 IGF2RP11717 2491 aa19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 SMLR1H3BR10 107 aa19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 CSTBP04080 98 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 GSTT2P0CG29 244 aa19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 RPUSD3Q6P087 351 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 STEAP2Q8NFT2 490 aa19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 OR11H7Q8NGC8 314 aa19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 FGF23Q9GZV9 251 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 PLSCR4Q9NRQ2 329 aa19.32■□□□□ 0.68
PDLIM2-203ENST00000339162 K7ENP7 123 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 MFNGO00587 321 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 RLN1P04808 185 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 TBC1D28Q2M2D7 210 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 INO80CQ6PI98 192 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 CPNE2Q96FN4 548 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 RADILQ96JH8 1075 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 MBD3L4A6NDZ8 208 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 MBD3L3A6NE82 208 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 MBD3L5A6NJ08 208 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 CD300LBA8K4G0 201 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 FOXI3A8MTJ6 420 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 SFTPBP07988 381 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 GSTP1P09211 210 aaKnown RBP19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 CXCL3P19876 107 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 PDZK1IP1Q13113 114 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 ARFRP1Q13795 201 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 TAF9Q16594 264 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 SCGB2B2Q4G0G5 96 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 FAM180AQ6UWF9 173 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 IDO2Q6ZQW0 420 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 C6orf201Q7Z4U5 140 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 CXorf67Q86X51 503 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 MBD3L2Q8NHZ7 208 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 SLC6A7Q99884 636 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 PROCRQ9UNN8 238 aa19.31■□□□□ 0.68
PDLIM2-203ENST00000339162 SSNA1O43805 119 aa19.3■□□□□ 0.68
PDLIM2-203ENST00000339162 CD74P04233 296 aa19.3■□□□□ 0.68
PDLIM2-203ENST00000339162 ZNF735P0CB33 412 aa19.3■□□□□ 0.68
PDLIM2-203ENST00000339162 CPT2P23786 658 aa19.3■□□□□ 0.68
PDLIM2-203ENST00000339162 GPM6AP51674 278 aa19.3■□□□□ 0.68
PDLIM2-203ENST00000339162 NKAPLQ5M9Q1 402 aa19.3■□□□□ 0.68
PDLIM2-203ENST00000339162 BPIFB2Q8N4F0 458 aa19.3■□□□□ 0.68
PDLIM2-203ENST00000339162 OR51F2Q8NH61 342 aa19.3■□□□□ 0.68
PDLIM2-203ENST00000339162 HPSE2Q8WWQ2 592 aa19.3■□□□□ 0.68
PDLIM2-203ENST00000339162 Q96M66 194 aa19.3■□□□□ 0.68
PDLIM2-203ENST00000339162 TM2D1Q9BX74 207 aa19.3■□□□□ 0.68
PDLIM2-203ENST00000339162 MOV10Q9HCE1 1003 aaKnown RBP19.3■□□□□ 0.68
PDLIM2-203ENST00000339162 PTPRQQ9UMZ3 2332 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 CGAP01215 116 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 COX5AP20674 150 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 HRH1P35367 487 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 ERVS71-1P61550 626 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 FAM189A2Q15884 450 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 ZBTB37Q5TC79 503 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 OR2T2Q6IF00 324 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 CISD2Q8N5K1 135 aaKnown RBP19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 SNAPC3Q92966 411 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 PECRQ9BY49 303 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 CNOT4O95628 575 aaKnown RBP19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 IGFBP7Q16270 282 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 PIGYQ3MUY2 71 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms