RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 SULF2Q8IWU5 870 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 APCDD1LQ8NCL9 501 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 GPR32P1Q8NGA4 272 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 OR2G3Q8NGZ4 309 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 DOK4Q8TEW6 326 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 TXNDC17Q9BRA2 123 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 DERL1Q9BUN8 251 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 LHX3Q9UBR4 397 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 RALYQ9UKM9 306 aaKnown RBP3.69□□□□□ -1.82
NEDD4-201ENST00000338963 CYSLTR1Q9Y271 337 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 RHBDD3Q9Y3P4 386 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 PKD1L3Q7Z443 1732 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 TRAV26-1A0A087WT03 109 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 ZNF727A8MUV8 499 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 SMIM22K7EJ46 135 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 ATP6V0CP27449 155 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 S100A7P31151 101 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 HSD52Q0P140 79 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 CAPSQ13938 189 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 TTLL4Q14679 1199 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 TGIF1Q15583 401 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 C2orf68Q2NKX9 166 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 DCAF4L1Q3SXM0 396 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM182Q6ZP80 229 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-201ENST00000338963 STPG4Q8N801 248 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 ASB10Q8WXI3 467 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 DNASE2BQ8WZ79 361 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 CITED1Q99966 193 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 EFCAB11Q9BUY7 163 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 OSER1Q9NX31 292 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 B3GALT1Q9Y5Z6 326 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 H3BNC9 293 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 HBZP02008 142 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 BCL2P10415 239 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 ADRA2CP18825 462 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 TSPOP30536 169 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 MRPS34P82930 218 aaKnown RBP3.69□□□□□ -1.82
NEDD4-201ENST00000338963 ZNF117Q03924 483 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 MRPL58Q14197 206 aaKnown RBP3.69□□□□□ -1.82
NEDD4-201ENST00000338963 KLHDC8AQ8IYD2 350 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 IL22RA2Q969J5 263 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 ST20Q9HBF5 79 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 SIRT3Q9NTG7 399 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-201ENST00000338963 ARL15Q9NXU5 204 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 MCTS1Q9ULC4 181 aaKnown RBP3.69□□□□□ -1.82
NEDD4-201ENST00000338963 SLC7A7Q9UM01 511 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 TRAV9-2A0A087WT02 112 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM250H0YL14 139 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 PQBP1O60828 265 aaKnown RBP3.69□□□□□ -1.82
NEDD4-201ENST00000338963 TSPAN13O95857 204 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 RHOQP17081 205 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 ACVR1BP36896 505 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 MPV17LQ2QL34 196 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 AMZ1Q400G9 498 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 CST9LP1Q5W188 147 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 KIAA0895LQ68EN5 471 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 CCDC144NLQ6NUI1 221 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 ZNF343Q6P1L6 599 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 WDR82Q6UXN9 313 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-201ENST00000338963 IL22RA1Q8N6P7 574 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 ADAMTS15Q8TE58 950 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 RNF128Q8TEB7 428 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM37Q8WXS4 190 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 CMC2Q9NRP2 79 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 HIF1ANQ9NWT6 349 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 PRSS50Q9UI38 385 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 CCNL1Q9UK58 526 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-201ENST00000338963 C1QTNF9BB2RNN3 333 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 K7EP34 96 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 ST8SIA3O43173 380 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 NDUFB8O95169 186 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 MT-ATP6P00846 226 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 FAM87AP0C7U9 286 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 NTSP30990 170 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 RND3P61587 244 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 PDE7AQ13946 482 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 SLC18B1Q6NT16 456 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 STAC2Q6ZMT1 411 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 NR2C2APQ86WQ0 139 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 UEVLDQ8IX04 471 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 UMODL1-AS1Q8N2C9 162 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 MUC15Q8N387 334 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM99Q8N816 258 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 PTPN18Q99952 460 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 CRISPLD2Q9H0B8 497 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 TXNIPQ9H3M7 391 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 SYNPO2LQ9H987 977 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 MMP25Q9NPA2 562 aa3.69□□□□□ -1.82
NEDD4-201ENST00000338963 SAA2-SAA4A0A096LPE2 208 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM213A2RRL7 107 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 HELTA6NFD8 242 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 CD160O95971 181 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 NPY1RP25929 384 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 TFPI2P48307 235 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 PPP1CBP62140 327 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 YOD1Q5VVQ6 348 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-201ENST00000338963 SLC25A34Q6PIV7 304 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 MRGPRGQ86SM5 289 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 VN1R17PQ8TDU5 208 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms