RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 C1QTNF6Q9BXI9 259 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 OR51B6Q9H340 312 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 ING4Q9UNL4 249 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 CHD8Q9HCK8 2581 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 IGHV1-18A0A0C4DH31 117 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 MELTFP08582 738 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 SFTPCP11686 197 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 AP3S2P59780 193 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 RPS27AP62979 156 aaKnown RBP13.29□□□□□ -0.28
LIMS1-202ENST00000338045 SSBP1Q04837 148 aaKnown RBP13.29□□□□□ -0.28
LIMS1-202ENST00000338045 CEACAM21Q3KPI0 293 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 C3orf36Q3SXR2 165 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 SIGIRRQ6IA17 410 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 ZDHHC23Q8IYP9 409 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 PXT1Q8NFP0 134 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 OR10R2Q8NGX6 335 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 HPSE2Q8WWQ2 592 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 S100PBPQ96BU1 408 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 URM1Q9BTM9 101 aaKnown RBP13.29□□□□□ -0.28
LIMS1-202ENST00000338045 FGF23Q9GZV9 251 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-202ENST00000338045 BANF2Q9H503 90 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 SCPEP1Q9HB40 452 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 JKAMPQ9P055 326 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 FAM240BA0A1B0GVZ2 78 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 PQLC2LA1A4F0 135 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 CENPXA8MT69 81 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 CRTAPO75718 401 aaPredicted RBP13.28□□□□□ -0.28
LIMS1-202ENST00000338045 RBBP9O75884 186 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 TMEM225BP0DP42 221 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 TUBG1P23258 451 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 VEGFCP49767 419 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 PLA1AQ53H76 456 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 DEDD2Q8WXF8 326 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 SEH1LQ96EE3 360 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 DMRTA2Q96SC8 542 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 S100A13Q99584 98 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 VKORC1Q9BQB6 163 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 NICN1Q9BSH3 213 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 TM2D1Q9BX74 207 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 OR2J1Q9GZK6 312 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 TUBG2Q9NRH3 451 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 MPC1Q9Y5U8 109 aa13.28□□□□□ -0.28
LIMS1-202ENST00000338045 RP1L1Q8IWN7 2480 aaPredicted RBP13.28□□□□□ -0.28
LIMS1-202ENST00000338045 DSPP15924 2871 aaKnown RBP13.27□□□□□ -0.28
LIMS1-202ENST00000338045 EEF1E1-BLOC1S5C9J1V9 151 aa13.27□□□□□ -0.28
LIMS1-202ENST00000338045 LPLP06858 475 aa13.27□□□□□ -0.28
LIMS1-202ENST00000338045 RAC2P15153 192 aa13.27□□□□□ -0.28
LIMS1-202ENST00000338045 MGMTP16455 207 aa13.27□□□□□ -0.28
LIMS1-202ENST00000338045 GUCA2AQ02747 115 aa13.27□□□□□ -0.28
LIMS1-202ENST00000338045 PDZK1IP1Q13113 114 aa13.27□□□□□ -0.28
LIMS1-202ENST00000338045 SNTB2Q13425 540 aaKnown RBP13.27□□□□□ -0.28
LIMS1-202ENST00000338045 SPATA46Q5T0L3 261 aa13.27□□□□□ -0.28
LIMS1-202ENST00000338045 UNQ6126/PRO20091Q6UXV3 157 aa13.27□□□□□ -0.28
LIMS1-202ENST00000338045 CADM3Q8N126 398 aa13.27□□□□□ -0.28
LIMS1-202ENST00000338045 STEAP2Q8NFT2 490 aa13.27□□□□□ -0.28
LIMS1-202ENST00000338045 CMBLQ96DG6 245 aa13.27□□□□□ -0.28
LIMS1-202ENST00000338045 METTL9Q9H1A3 318 aa13.27□□□□□ -0.28
LIMS1-202ENST00000338045 MMP28Q9H239 520 aa13.27□□□□□ -0.28
LIMS1-202ENST00000338045 TAS2R8Q9NYW2 309 aa13.27□□□□□ -0.28
LIMS1-202ENST00000338045 IL36GQ9NZH8 169 aa13.27□□□□□ -0.28
LIMS1-202ENST00000338045 IGHV2OR16-5A0A0B4J2B6 119 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 ANKRD30BLA7E2S9 258 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 FOXI3A8MTJ6 420 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-202ENST00000338045 LILRA1O75019 489 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 ZNF780AO75290 641 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-202ENST00000338045 ERVS71-1P61550 626 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 FAM27E3Q08E93 113 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 OR2T2Q6IF00 324 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 PLET1Q6UQ28 207 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 LIX1LQ8IVB5 337 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 ZSCAN4Q8NAM6 433 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-202ENST00000338045 RELL2Q8NC24 303 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-202ENST00000338045 ST6GALNAC3Q8NDV1 305 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 OR56B1Q8NGI3 324 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 OR5A2Q8NGI9 324 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 OR1J1Q8NGS3 322 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 OR10K1Q8NGX5 313 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 SLC25A40Q8TBP6 338 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 MARS2Q96GW9 593 aaKnown RBP13.27□□□□□ -0.29
LIMS1-202ENST00000338045 ZMAT3Q9HA38 289 aaKnown RBP13.27□□□□□ -0.29
LIMS1-202ENST00000338045 ELOVL5Q9NYP7 299 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 MRPL15Q9P015 296 aaKnown RBP13.27□□□□□ -0.29
LIMS1-202ENST00000338045 NLKQ9UBE8 527 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 SH3BGRL2Q9UJC5 107 aa13.27□□□□□ -0.29
LIMS1-202ENST00000338045 IGKV1-12A0A0C4DH73 117 aa13.26□□□□□ -0.29
LIMS1-202ENST00000338045 TMEM235A6NFC5 223 aa13.26□□□□□ -0.29
LIMS1-202ENST00000338045 SOCS1O15524 211 aa13.26□□□□□ -0.29
LIMS1-202ENST00000338045 SPRY1O43609 319 aaPredicted RBP13.26□□□□□ -0.29
LIMS1-202ENST00000338045 ANGPTL7O43827 346 aa13.26□□□□□ -0.29
LIMS1-202ENST00000338045 IGKV1D-12P01611 117 aa13.26□□□□□ -0.29
LIMS1-202ENST00000338045 SERPINA2P20848 420 aa13.26□□□□□ -0.29
LIMS1-202ENST00000338045 RAD52P43351 418 aa13.26□□□□□ -0.29
LIMS1-202ENST00000338045 TMEM50BP56557 158 aa13.26□□□□□ -0.29
LIMS1-202ENST00000338045 CDNFQ49AH0 187 aa13.26□□□□□ -0.29
LIMS1-202ENST00000338045 OLFML2AQ68BL7 652 aa13.26□□□□□ -0.29
LIMS1-202ENST00000338045 Q6ZTK2 550 aa13.26□□□□□ -0.29
LIMS1-202ENST00000338045 GLCCI1Q86VQ1 547 aa13.26□□□□□ -0.29
LIMS1-202ENST00000338045 C1orf174Q8IYL3 243 aa13.26□□□□□ -0.29
LIMS1-202ENST00000338045 BHLHE23Q8NDY6 225 aa13.26□□□□□ -0.29
LIMS1-202ENST00000338045 OR5P3Q8WZ94 311 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms