RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 PATE3B3GLJ2 98 aa12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 ZNHIT1O43257 154 aa12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 ATG12O94817 140 aa12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 FARS2O95363 451 aaKnown RBP12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 NME2P22392 152 aa12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 FKBP2P26885 142 aaKnown RBP12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 ZNF84P51523 738 aa12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 SSR4P51571 173 aa12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 LSM6P62312 80 aaKnown RBP12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 RSU1Q15404 277 aa12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 EXT1Q16394 746 aa12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 LPAL2Q16609 132 aa12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 CLEC9AQ6UXN8 241 aa12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 SULF2Q8IWU5 870 aa12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 SEMA6DQ8NFY4 1073 aa12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 AKR7LQ8NHP1 331 aa12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 FBXO17Q96EF6 278 aa12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 NUDT16L1Q9BRJ7 211 aaKnown RBP12.3□□□□□ -0.44
ATP2C1-201ENST00000328560 ZNF850A8MQ14 1090 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 MTRF1O75570 445 aaKnown RBP12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 PRF1P14222 555 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 RCC1P18754 421 aaPredicted RBP12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 CCL1P22362 96 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 ADH6P28332 368 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 THBS4P35443 961 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 RSPO1Q2MKA7 263 aaPredicted RBP12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 ZNF468Q5VIY5 522 aaPredicted RBP12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 MRPL14Q6P1L8 145 aaKnown RBP12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 PRSS54Q6PEW0 395 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 RPS19BP1Q86WX3 136 aaKnown RBP12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 PUSL1Q8N0Z8 303 aaKnown RBP12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 SPTSSAQ969W0 71 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 C2orf50Q96LR7 162 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 ALKBH3Q96Q83 286 aaPredicted RBP12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 NAA11Q9BSU3 229 aaPredicted RBP12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 PCP4L1A6NKN8 68 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 CER1O95813 267 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 ICAM2P13598 275 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 CTRB1P17538 263 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 KCNMB1Q16558 191 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 RPL7L1Q6DKI1 246 aaKnown RBP12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 CTRB2Q6GPI1 263 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 ZNF774Q6NX45 483 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 CBLN2Q8IUK8 224 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 MAML2Q8IZL2 1156 aaPredicted RBP12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 SAV1Q9H4B6 383 aaPredicted RBP12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 CYTL1Q9NRR1 136 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 OSGIN2Q9Y236 505 aa12.29□□□□□ -0.44
ATP2C1-201ENST00000328560 ZIC3O60481 467 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 TRAPPC6AO75865 159 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 PTGER4P35408 488 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 FOLR3P41439 243 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 HAGHLQ6PII5 290 aaPredicted RBP12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 SGK3Q96BR1 496 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 CHST5Q9GZS9 411 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 SLC26A1Q9H2B4 701 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 CCDC163A0A0D9SF12 145 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 LRP3O75074 770 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 IGHV3-9P01782 118 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 LIFP15018 202 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 B4GALT1P15291 398 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 ACKR3P25106 362 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 OR2A2Q6IF42 318 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 CLRN3Q8NCR9 226 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 OR14L1PQ8NHC6 308 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 HAS2Q92819 552 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 EMG1Q92979 244 aaKnown RBP12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 CRLF2Q9HC73 371 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 ZNF629Q9UEG4 869 aaPredicted RBP12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 SGCEO43556 437 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 EIF1BO60739 113 aaKnown RBP12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 UMODP07911 640 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 H3F3CQ6NXT2 135 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 FAM89BQ8N5H3 189 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 PP6455Q8WZ26 134 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 CNTNAP3BQ96NU0 1288 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 AIFM2Q9BRQ8 373 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 SRXN1Q9BYN0 137 aa12.28□□□□□ -0.44
ATP2C1-201ENST00000328560 EXPH5Q8NEV8 1989 aa12.27□□□□□ -0.44
ATP2C1-201ENST00000328560 IGHV1-45A0A0A0MS14 117 aa12.27□□□□□ -0.44
ATP2C1-201ENST00000328560 DKK1O94907 266 aa12.27□□□□□ -0.44
ATP2C1-201ENST00000328560 IFNA2P01563 188 aa12.27□□□□□ -0.44
ATP2C1-201ENST00000328560 OTX2P32243 289 aa12.27□□□□□ -0.44
ATP2C1-201ENST00000328560 RPS18P62269 152 aaKnown RBP12.27□□□□□ -0.44
ATP2C1-201ENST00000328560 H3F3AP84243 136 aa12.27□□□□□ -0.44
ATP2C1-201ENST00000328560 TSPO2Q5TGU0 170 aa12.27□□□□□ -0.44
ATP2C1-201ENST00000328560 CRIP3Q6Q6R5 217 aa12.27□□□□□ -0.44
ATP2C1-201ENST00000328560 LHFPL1Q86WI0 220 aa12.27□□□□□ -0.44
ATP2C1-201ENST00000328560 SGPP2Q8IWX5 399 aa12.27□□□□□ -0.44
ATP2C1-201ENST00000328560 NABP1Q96AH0 204 aa12.27□□□□□ -0.44
ATP2C1-201ENST00000328560 TLNRD1Q9H1K6 362 aa12.27□□□□□ -0.44
ATP2C1-201ENST00000328560 B3GALT1Q9Y5Z6 326 aa12.27□□□□□ -0.44
ATP2C1-201ENST00000328560 HS3ST3B1Q9Y662 390 aa12.27□□□□□ -0.44
ATP2C1-201ENST00000328560 SERPINE3A8MV23 424 aa12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 MED6O75586 246 aa12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 FGF5P12034 268 aa12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 DSCR4P56555 118 aaPredicted RBP12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 SVBPQ8N300 66 aa12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 SLC30A7Q8NEW0 376 aa12.27□□□□□ -0.45
ATP2C1-201ENST00000328560 FNDC9Q8TBE3 224 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms