RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 ZIC3O60481 467 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 CD63P08962 238 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 RRASP10301 218 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 CA6P23280 308 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 ECH1Q13011 328 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 PIGYQ3MUY2 71 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 M1APQ8TC57 530 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 ST7LQ8TDW4 575 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 TREM2Q9NZC2 230 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 NPAP1Q9NZP6 1156 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 C9orf172C9J069 976 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 LGALS8O00214 317 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 SELEP16581 610 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 PTBP1P26599 531 aaKnown RBP eCLIP11.95□□□□□ -0.5
SRRM1-201ENST00000323848 GABRA2P47869 451 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 OR2M7Q8NG81 312 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 PSMF1Q92530 271 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 CPNE4Q96A23 557 aaPredicted RBP11.95□□□□□ -0.5
SRRM1-201ENST00000323848 PRMT8Q9NR22 394 aaPredicted RBP11.95□□□□□ -0.5
SRRM1-201ENST00000323848 B3GAT1Q9P2W7 334 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 MLXQ9UH92 298 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 KLF13Q9Y2Y9 288 aaPredicted RBP11.95□□□□□ -0.5
SRRM1-201ENST00000323848 ANKRD20A5PA0PJZ0 165 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 PINLYPA6NC86 204 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 ZNF732B4DXR9 585 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 SIRPB1O00241 398 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 AGFG2O95081 481 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 NDUFB6O95139 128 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 MMP16P51512 607 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 VAMP2P63027 116 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 DHRS2Q13268 280 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 EXOSC2Q13868 293 aaKnown RBP11.95□□□□□ -0.5
SRRM1-201ENST00000323848 TMEM251Q8N6I4 163 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 ZNF680Q8NEM1 530 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 OR11H4Q8NGC9 324 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 PPP1R1CQ8WVI7 109 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 SCGB3A2Q96PL1 93 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 VRK1Q99986 396 aaPredicted RBP11.95□□□□□ -0.5
SRRM1-201ENST00000323848 GON7Q9BXV9 100 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 LY6G6EA0A0G2JKS1 128 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 S100GP29377 79 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 FOXG1P55316 489 aaPredicted RBP11.95□□□□□ -0.5
SRRM1-201ENST00000323848 C17orf78Q8N4C9 275 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 DLL4Q9NR61 685 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 U3KQA8 63 aa11.95□□□□□ -0.5
SRRM1-201ENST00000323848 A0A087WZY1 265 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 B8ZZF3 427 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 XRCC2O43543 280 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 PPA1Q15181 289 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 IAH1Q2TAA2 248 aaPredicted RBP11.94□□□□□ -0.5
SRRM1-201ENST00000323848 DCAF12L2Q5VW00 463 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 SNIP1Q8TAD8 396 aaKnown RBP11.94□□□□□ -0.5
SRRM1-201ENST00000323848 IMMP1LQ96LU5 166 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 HINT2Q9BX68 163 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 G6PC2Q9NQR9 355 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 OR5H14A6NHG9 310 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 HSD17B6O14756 317 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 PHF1O43189 567 aaPredicted RBP11.94□□□□□ -0.5
SRRM1-201ENST00000323848 NPIPB7O75200 414 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 ZNF250P15622 560 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 FAM189A2Q15884 450 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 SKA3Q8IX90 412 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 FBXO17Q96EF6 278 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 TTTY12Q9BZ98 90 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 HRH4Q9H3N8 390 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 KCNK7Q9Y2U2 307 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 FLVCR1Q9Y5Y0 555 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 GEMIN2O14893 280 aaKnown RBP11.94□□□□□ -0.5
SRRM1-201ENST00000323848 DHRS3O75911 302 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 PDGFAP04085 211 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 HACD4Q5VWC8 232 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 GLDNQ6ZMI3 551 aaPredicted RBP11.94□□□□□ -0.5
SRRM1-201ENST00000323848 OR52H1Q8NGJ2 320 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 SUCNR1Q9BXA5 334 aa11.94□□□□□ -0.5
SRRM1-201ENST00000323848 KIAA1549LQ6ZVL6 1849 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 CDC14BO60729 498 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 NXPH2O95156 264 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 OR5H8P0DN80 308 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 VSIG10L2P0DP72 767 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 FCGR2CP31995 323 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 CLPPQ16740 277 aaPredicted RBP11.93□□□□□ -0.5
SRRM1-201ENST00000323848 TMEM217Q8N7C4 229 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 ZNF441Q8N8Z8 693 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.93□□□□□ -0.52e-7■□□□□ 9.1
SRRM1-201ENST00000323848 MBD2Q9UBB5 411 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 MEMO1Q9Y316 297 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 ZNF175Q9Y473 711 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 CSAG2Q9Y5P2 127 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 TRBV5-5A0A0J9YX44 114 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 PPP3CBP16298 524 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 PSG4Q00888 419 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 TMEM200AQ86VY9 491 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 ADAD2Q8NCV1 583 aaKnown RBP11.93□□□□□ -0.5
SRRM1-201ENST00000323848 TMEM185AQ8NFB2 350 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 ANGPTL4Q9BY76 406 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 GPR160Q9UJ42 338 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 RALYQ9UKM9 306 aaKnown RBP11.93□□□□□ -0.5
SRRM1-201ENST00000323848 KLK13Q9UKR3 277 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 NUP50Q9UKX7 468 aa11.93□□□□□ -0.5
SRRM1-201ENST00000323848 TIMM8AO60220 97 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms