RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 GLS2Q9UI32 602 aa19.51■□□□□ 0.71
PNKP-201ENST00000322344 TIMM10BQ9Y5J6 103 aa19.51■□□□□ 0.71
PNKP-201ENST00000322344 NCOA6Q14686 2063 aaPredicted RBP19.5■□□□□ 0.71
PNKP-201ENST00000322344 F5H0A9 414 aaPredicted RBP19.5■□□□□ 0.71
PNKP-201ENST00000322344 SERPINA5P05154 406 aa19.5■□□□□ 0.71
PNKP-201ENST00000322344 ACKR3P25106 362 aa19.5■□□□□ 0.71
PNKP-201ENST00000322344 CYB561P49447 251 aa19.5■□□□□ 0.71
PNKP-201ENST00000322344 SUPT4H1P63272 117 aaKnown RBP19.5■□□□□ 0.71
PNKP-201ENST00000322344 SLC9A3R2Q15599 337 aa19.5■□□□□ 0.71
PNKP-201ENST00000322344 TUSC1Q2TAM9 212 aa19.5■□□□□ 0.71
PNKP-201ENST00000322344 BEX5Q5H9J7 111 aa19.5■□□□□ 0.71
PNKP-201ENST00000322344 DCUN1D4Q92564 292 aa19.5■□□□□ 0.71
PNKP-201ENST00000322344 STRADBQ9C0K7 418 aa19.5■□□□□ 0.71
PNKP-201ENST00000322344 PLEKHJ1Q9NW61 149 aa19.5■□□□□ 0.71
PNKP-201ENST00000322344 EDARQ9UNE0 448 aa19.5■□□□□ 0.71
PNKP-201ENST00000322344 TEX13DA0A0J9YY54 714 aaPredicted RBP19.49■□□□□ 0.71
PNKP-201ENST00000322344 SDCBPO00560 298 aaPredicted RBP19.49■□□□□ 0.71
PNKP-201ENST00000322344 LCATP04180 440 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 RFPL3SP0C7P2 107 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 ZNF883P0CG24 379 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 ZNF32P17041 273 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 NTF4P34130 210 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 SNTB1Q13884 538 aaKnown RBP19.49■□□□□ 0.71
PNKP-201ENST00000322344 PAN3Q58A45 887 aaKnown RBP19.49■□□□□ 0.71
PNKP-201ENST00000322344 PDSS1Q5T2R2 415 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 ROBO4Q8WZ75 1007 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 ZNF75AQ96N20 296 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 FOXB1Q99853 325 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 SHARPINQ9H0F6 387 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 HSF4Q9ULV5 492 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 C14orf166Q9Y224 244 aaKnown RBP19.49■□□□□ 0.71
PNKP-201ENST00000322344 MED12Q93074 2177 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 TRAPPC6AO75865 159 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 HTR3BO95264 441 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 CSTBP04080 98 aaKnown RBP19.49■□□□□ 0.71
PNKP-201ENST00000322344 WIPI1Q5MNZ9 446 aaPredicted RBP19.49■□□□□ 0.71
PNKP-201ENST00000322344 LHFPL2Q6ZUX7 228 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 ZNF100Q8IYN0 542 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 OR2AE1Q8NHA4 323 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 STOML3Q8TAV4 291 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 CPNE4Q96A23 557 aaPredicted RBP19.49■□□□□ 0.71
PNKP-201ENST00000322344 CYYR1Q96J86 154 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 ZNF701Q9NV72 531 aaPredicted RBP19.49■□□□□ 0.71
PNKP-201ENST00000322344 GPR160Q9UJ42 338 aa19.49■□□□□ 0.71
PNKP-201ENST00000322344 LINC01387J3KSC0 135 aa19.48■□□□□ 0.71
PNKP-201ENST00000322344 HOXD4P09016 255 aaPredicted RBP19.48■□□□□ 0.71
PNKP-201ENST00000322344 LYL1P12980 280 aa19.48■□□□□ 0.71
PNKP-201ENST00000322344 GABRR1P24046 479 aa19.48■□□□□ 0.71
PNKP-201ENST00000322344 HTR5AP47898 357 aa19.48■□□□□ 0.71
PNKP-201ENST00000322344 RSU1Q15404 277 aa19.48■□□□□ 0.71
PNKP-201ENST00000322344 ASCL4Q6XD76 172 aa19.48■□□□□ 0.71
PNKP-201ENST00000322344 ALKBH3Q96Q83 286 aaPredicted RBP19.48■□□□□ 0.71
PNKP-201ENST00000322344 P4HTMQ9NXG6 502 aa19.48■□□□□ 0.71
PNKP-201ENST00000322344 F8VVB4 439 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 F8VWA3 439 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 CYTIPO60759 359 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 B4GALT1P15291 398 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 CNR1P21554 472 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 GDF1P27539 372 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 RGS19P49795 217 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 RBP2P50120 134 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 HGFACQ04756 655 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 SIGLEC14Q08ET2 396 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 FAM74A1Q5RGS3 127 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 TMEM42Q69YG0 159 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 DBX2Q6ZNG2 339 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 TIPARPQ7Z3E1 657 aaKnown RBP19.47■□□□□ 0.71
PNKP-201ENST00000322344 C6orf201Q7Z4U5 140 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 MAFIPQ8WZ33 124 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 TAAR9Q96RI9 348 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 RNF126Q9BV68 326 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 OR2H1Q9GZK4 316 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 BARX1Q9HBU1 254 aaPredicted RBP19.47■□□□□ 0.71
PNKP-201ENST00000322344 PGAM2P15259 253 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 RPS2P15880 293 aaKnown RBP19.47■□□□□ 0.71
PNKP-201ENST00000322344 PI3P19957 117 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 PSG4Q00888 419 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 NAAAQ02083 359 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 CEACAM16Q2WEN9 425 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 ANKRD55Q3KP44 614 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 PRSS54Q6PEW0 395 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 AKR7LQ8NHP1 331 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 PIK3IP1Q96FE7 263 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 BORCS8Q96FH0 119 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 C2orf50Q96LR7 162 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 DDA1Q9BW61 102 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 GPR35Q9HC97 309 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 DEPPQ9NTK1 212 aa19.47■□□□□ 0.71
PNKP-201ENST00000322344 MCTS1Q9ULC4 181 aaKnown RBP19.47■□□□□ 0.71
PNKP-201ENST00000322344 BOKQ9UMX3 212 aaPredicted RBP19.47■□□□□ 0.71
PNKP-201ENST00000322344 FAM230AA0A1W2PPH8 454 aa19.46■□□□□ 0.71
PNKP-201ENST00000322344 LGALS8O00214 317 aa19.46■□□□□ 0.71
PNKP-201ENST00000322344 GLRA1P23415 457 aa19.46■□□□□ 0.71
PNKP-201ENST00000322344 NKAPLQ5M9Q1 402 aa19.46■□□□□ 0.71
PNKP-201ENST00000322344 RPUSD3Q6P087 351 aaKnown RBP19.46■□□□□ 0.71
PNKP-201ENST00000322344 GLRX5Q86SX6 157 aa19.46■□□□□ 0.71
PNKP-201ENST00000322344 SLC38A6Q8IZM9 456 aa19.46■□□□□ 0.71
PNKP-201ENST00000322344 ZSCAN4Q8NAM6 433 aaPredicted RBP19.46■□□□□ 0.71
PNKP-201ENST00000322344 TMEM45BQ96B21 275 aa19.46■□□□□ 0.71
PNKP-201ENST00000322344 WNT5BQ9H1J7 359 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms