RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 TECTAO75443 2155 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 F5H5K5 113 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 OR8U9P0C7N5 309 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 PAX6P26367 422 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 LAP3P28838 519 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 FAM57BQ71RH2 274 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 FAM24BQ8N5W8 94 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 OR8U1Q8NH10 309 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 MARCH1Q8TCQ1 289 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 PFDN5Q99471 154 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 BOD1L1Q8NFC6 3051 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 C7orf77A4D0Y5 90 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 ZNF729A6NN14 1252 aaPredicted RBP13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 IGHMP01871 453 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 UMODP07911 640 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 AWAT1Q58HT5 328 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 FDX2Q6P4F2 183 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 BTNL8Q6UX41 500 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 TRAPPC6BQ86SZ2 158 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 NAXEQ8NCW5 288 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 ZNF319Q9P2F9 582 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 CHCHD2Q9Y6H1 151 aaPredicted RBP13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 DNAJC13O75165 2243 aa13.68□□□□□ -0.22
SHROOM1-201ENST00000319854 FBXO24O75426 580 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 DUS4LO95620 317 aaKnown RBP13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 PCOLCEQ15113 449 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 DEFB123Q8N688 67 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 ZNF283Q8N7M2 679 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 AGBL5Q8NDL9 886 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 RNF133Q8WVZ7 376 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 PRRT1Q99946 306 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 BANF2Q9H503 90 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 SLC5A6Q9Y289 635 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 A0A1W2PP11 408 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 MFNGO00587 321 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 TRAF3IP2O43734 574 aaPredicted RBP13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 MRPL14Q6P1L8 145 aaKnown RBP13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 TCEAL7Q9BRU2 100 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 RBM24Q9BX46 236 aaKnown RBP13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 SLC2A8Q9NY64 477 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 B3GALT1Q9Y5Z6 326 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 HS3ST3B1Q9Y662 390 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 ADAMTS20P59510 1910 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 LDLRAD4O15165 306 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 YIF1AO95070 293 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 GNB3P16520 340 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 RAB5AP20339 215 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 HTR5AP47898 357 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 ZNF121P58317 390 aaPredicted RBP13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 TCTEX1D2Q8WW35 142 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 GUCD1Q96NT3 240 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 ZNF385AQ96PM9 386 aaKnown RBP13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 FAM206AQ9NX38 181 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 DCAF16Q9NXF7 216 aa13.67□□□□□ -0.22
SHROOM1-201ENST00000319854 C9J4A7 227 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 WRBO00258 174 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 TP53I11O14683 189 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 SRSF10O75494 262 aaKnown RBP13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 PMP2P02689 132 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 ZNF20P17024 532 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 PI3P19957 117 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 ZP4Q12836 540 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 AWAT2Q6E213 333 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 ADGRE4PQ86SQ3 457 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 YRDCQ86U90 279 aaKnown RBP13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 NOXO1Q8NFA2 376 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 SAT2Q96F10 170 aaPredicted RBP13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 TMEM41AQ96HV5 264 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 RHOVQ96L33 236 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 NMES1Q9C002 83 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 SLC5A7Q9GZV3 580 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 SLCO5A1Q9H2Y9 848 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 GPR84Q9NQS5 396 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 IFITM10A6NMD0 228 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 ZNHIT1O43257 154 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 PGA4P0DJD7 388 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 PGA3P0DJD8 388 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 SUMO3P55854 103 aaPredicted RBP13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 SLC9A3R2Q15599 337 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 ZNF260Q3ZCT1 412 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 PYY3Q5JQD4 70 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 ANGPTL5Q86XS5 388 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 ZDHHC22Q8N966 263 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 LIN37Q96GY3 246 aaPredicted RBP13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 GPER1Q99527 375 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 OCSTAMPQ9BR26 566 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 NICN1Q9BSH3 213 aa13.66□□□□□ -0.22
SHROOM1-201ENST00000319854 LAMA5O15230 3695 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 AP4M1O00189 453 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 GPR37O15354 613 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 GABREP78334 506 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 MEF2DQ14814 521 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 PLXDC2Q6UX71 529 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 DMRTC2Q8IXT2 367 aaPredicted RBP13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 SLC25A43Q8WUT9 341 aaPredicted RBP13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 AQP3Q92482 292 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 OR10C1Q96KK4 312 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 MRPL13Q9BYD1 178 aaKnown RBP13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 DKKL1Q9UK85 242 aa13.65□□□□□ -0.22
SHROOM1-201ENST00000319854 DMRT1Q9Y5R6 373 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms