RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ZNF32P17041 273 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 GALNSP34059 522 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 PDZD11Q5EBL8 140 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 CT45A1Q5HYN5 189 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 ADGRG3Q86Y34 549 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 C9orf62Q8N4C0 152 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 CISD2Q8N5K1 135 aaKnown RBP12.26□□□□□ -0.45
SPAST-201ENST00000315285 OR5M8Q8NGP6 311 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 CT45A3Q8NHU0 189 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 NUBPLQ8TB37 319 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 ADAM19Q9H013 955 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 PROCRQ9UNN8 238 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 IGKV1-8A0A0C4DH67 115 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 FABP6P51161 128 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 TRA2AQ13595 282 aaKnown RBP eCLIP12.26□□□□□ -0.45
SPAST-201ENST00000315285 CIB3Q96Q77 187 aaPredicted RBP12.26□□□□□ -0.45
SPAST-201ENST00000315285 EGLN1Q9GZT9 426 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 XIRP1Q702N8 1843 aaKnown RBP12.26□□□□□ -0.45
SPAST-201ENST00000315285 TDRD15B5MCY1 1934 aaKnown RBP12.26□□□□□ -0.45
SPAST-201ENST00000315285 B3GNTL1Q67FW5 361 aaPredicted RBP12.26□□□□□ -0.45
SPAST-201ENST00000315285 TRILQ7L0X0 811 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 TSEN54Q7Z6J9 526 aaKnown RBP12.26□□□□□ -0.45
SPAST-201ENST00000315285 DEFB108BQ8NET1 73 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 OR11H7Q8NGC8 314 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 FAM173AQ9BQD7 235 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 CKAP5Q14008 2032 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 TRAV8-7A0A075B6U6 113 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 hCG_1809904A0A1W2PP81 198 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 A0A1W2PPE2 198 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 A0A1W2PR64 198 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 A0A1W2PRV1 198 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 OR5H15A6NDH6 313 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 LANCL1O43813 399 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 IL2RAP01589 272 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 ZNF718Q3SXZ3 478 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 OR10AC1Q8NH08 325 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 SLC39A7Q92504 469 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 P4HTMQ9NXG6 502 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 WNT16Q9UBV4 365 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 TMED3Q9Y3Q3 217 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 RP1P56715 2156 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 SFTA3P0C7M3 94 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 COX5AP20674 150 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 KLF9Q13886 244 aaPredicted RBP12.25□□□□□ -0.45
SPAST-201ENST00000315285 BPIFCQ8NFQ6 507 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 OR1J1Q8NGS3 322 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 OR6X1Q8NH79 312 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 SMIM7Q9BQ49 75 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 SHARPINQ9H0F6 387 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 PPP1R3EQ9H7J1 279 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 PDGFBP01127 241 aaPredicted RBP12.25□□□□□ -0.45
SPAST-201ENST00000315285 MBP02144 154 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 RAC1P63000 192 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 PJVKQ0ZLH3 352 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 OR8B12Q8NGG6 310 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 PHYHIPLQ96FC7 376 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 TAAR9Q96RI9 348 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 ARRDC1-AS1Q9H2J1 176 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 NARFLQ9H6Q4 476 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 SIRT4Q9Y6E7 314 aaPredicted RBP12.25□□□□□ -0.45
SPAST-201ENST00000315285 CLEC18AA5D8T8 446 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 PTP4A3O75365 173 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 ERGP11308 486 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 EPHA8P29322 1005 aaPredicted RBP12.25□□□□□ -0.45
SPAST-201ENST00000315285 ACAA2P42765 397 aaKnown RBP12.25□□□□□ -0.45
SPAST-201ENST00000315285 GNG3P63215 75 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 CLEC18CQ8NCF0 446 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 PTPMT1Q8WUK0 201 aaPredicted RBP12.25□□□□□ -0.45
SPAST-201ENST00000315285 MMP26Q9NRE1 261 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 DTX4Q9Y2E6 619 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 ZNFX1Q9P2E3 1918 aaKnown RBP12.25□□□□□ -0.45
SPAST-201ENST00000315285 CSF2RBP32927 897 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 OR1C1Q15619 314 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 MIDNQ504T8 468 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 ZNF561Q8N587 486 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 COMMD1Q8N668 190 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 CABLES2Q9BTV7 478 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 TMPRSS13Q9BYE2 586 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 LAMP3Q9UQV4 416 aa12.25□□□□□ -0.45
SPAST-201ENST00000315285 RGPD4Q7Z3J3 1758 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 ZIC2O95409 532 aaPredicted RBP12.24□□□□□ -0.45
SPAST-201ENST00000315285 AKR1C3P42330 323 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 GABRA4P48169 554 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 LIMK1P53667 647 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 ACOT6Q3I5F7 207 aaPredicted RBP12.24□□□□□ -0.45
SPAST-201ENST00000315285 MRGPREQ86SM8 312 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 VASH2Q86V25 355 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 PRSS27Q9BQR3 290 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 ST6GALNAC2Q9UJ37 374 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 WNK3Q9BYP7 1800 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 GUK1Q16774 197 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 PRSS53Q2L4Q9 553 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 ACER2Q5QJU3 275 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 PRSS54Q6PEW0 395 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 ZNF439Q8NDP4 499 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 EDARADDQ8WWZ3 215 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 GALMQ96C23 342 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 PIK3IP1Q96FE7 263 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 SLC35E1Q96K37 410 aa12.24□□□□□ -0.45
SPAST-201ENST00000315285 DOCK3Q8IZD9 2030 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms