RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 RUSC1-AS1Q66K80 236 aa12.04□□□□□ -0.48
PPP1CA-201ENST00000312989 BRD3OSQ6XYD6 125 aa12.04□□□□□ -0.48
PPP1CA-201ENST00000312989 KCTD8Q6ZWB6 473 aa12.04□□□□□ -0.48
PPP1CA-201ENST00000312989 MOB3CQ70IA8 216 aa12.04□□□□□ -0.48
PPP1CA-201ENST00000312989 ENTHD1Q8IYW4 607 aa12.04□□□□□ -0.48
PPP1CA-201ENST00000312989 OR10H4Q8NGA5 316 aa12.04□□□□□ -0.48
PPP1CA-201ENST00000312989 C8orf46Q8TAG6 207 aa12.04□□□□□ -0.48
PPP1CA-201ENST00000312989 WDFY2Q96P53 400 aa12.04□□□□□ -0.48
PPP1CA-201ENST00000312989 DNTTIP1Q9H147 329 aa12.04□□□□□ -0.48
PPP1CA-201ENST00000312989 NLKQ9UBE8 527 aa12.04□□□□□ -0.48
PPP1CA-201ENST00000312989 MAB21L2Q9Y586 359 aa12.04□□□□□ -0.48
PPP1CA-201ENST00000312989 TRIM77I1YAP6 450 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 SIGLEC5O15389 551 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 NRASP01111 189 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 LIPFP07098 398 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 PSG2P11465 335 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 MPZP25189 248 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 MTNR1AP48039 350 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 NANOS3P60323 173 aaKnown RBP12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 GMFBP60983 142 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 TP53I3Q53FA7 332 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 CLVS2Q5SYC1 327 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 PLCXD3Q63HM9 321 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 HAGHLQ6PII5 290 aaPredicted RBP12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 COMMD2Q86X83 199 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 CALHM1Q8IU99 346 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 Q8N7P7 452 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 YIPF7Q8N8F6 280 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 POC1AQ8NBT0 407 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 APH1BQ8WW43 257 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 ST8SIA4Q92187 359 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 ZNF488Q96MN9 340 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 DUX5Q96PT3 197 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 JMJD8Q96S16 334 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 DCTN5Q9BTE1 182 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 HES4Q9HCC6 221 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 GPR173Q9NS66 373 aa12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 EXOGQ9Y2C4 368 aaKnown RBP12.03□□□□□ -0.48
PPP1CA-201ENST00000312989 IGKV1-27A0A075B6S5 117 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 CLDN34H7C241 214 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 NOS1APO75052 506 aaPredicted RBP12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 MTRF1O75570 445 aaKnown RBP12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 ECDO95905 644 aaPredicted RBP12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 ACAA1P09110 424 aaPredicted RBP12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 PGA5P0DJD9 388 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 PRTN3P24158 256 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 ERVK11-1P61568 191 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 ZNF91Q05481 1191 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 SLC9A3R2Q15599 337 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 UBE2V2Q15819 145 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 DEFB112Q30KQ8 113 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 FDX2Q6P4F2 183 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 SLC36A1Q7Z2H8 476 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 THAP5Q7Z6K1 395 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 RHOXF1Q8NHV9 184 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 RFKQ969G6 155 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 LGALS12Q96DT0 336 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 RNFT2Q96EX2 444 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 SDSLQ96GA7 329 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 NRIP2Q9BQI9 281 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 PCGF1Q9BSM1 259 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 C9orf16Q9BUW7 83 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 MS4A7Q9GZW8 240 aaPredicted RBP12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 GTF2A1LQ9UNN4 478 aa12.02□□□□□ -0.49
PPP1CA-201ENST00000312989 OR2AT4A6NND4 320 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 J3QT63 122 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 TOX4O94842 621 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 RNASE1P07998 156 aaKnown RBP12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 GLRA1P23415 457 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 DLX1P56177 255 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 ARF6P62330 175 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 IKZF1Q13422 519 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 ODF4Q2M2E3 257 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 MEDAGQ5VYS4 303 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 ACP7Q6ZNF0 438 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 RDH10Q8IZV5 341 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 PIP4P2Q8N4L2 257 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 CD177Q8N6Q3 437 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 PNLDC1Q8NA58 520 aaKnown RBP12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 TAF15Q92804 592 aaKnown RBP eCLIP12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 TNFRSF14Q92956 283 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 DMRTB1Q96MA1 342 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 HIST1H2AAQ96QV6 131 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 CHST5Q9GZS9 411 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 CNTD2Q9H8S5 307 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 IMPAD1Q9NX62 359 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 FRRS1LQ9P0K9 344 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 KPTNQ9Y664 436 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 TRRAPQ9Y4A5 3859 aa12.01□□□□□ -0.49
PPP1CA-201ENST00000312989 IGKV1-9A0A0C4DH69 117 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 LOC107986453A0A1B0GWG9 222 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 ANKRD61A6NGH8 418 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 F8VVB4 439 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 F8VWA3 439 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 H3BSH0 61 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 SLC16A6O15403 523 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 IGHA1P01876 353 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 DBTP11182 482 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms