RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 RPL11P62913 178 aaKnown RBP6.87□□□□□ -1.31
SF3B3-201ENST00000302516 PMS2P11Q13670 270 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 TMEM104Q8NE00 496 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 IFI44Q8TCB0 444 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 SCMH1Q96GD3 660 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 PRR14Q9BWN1 585 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 ZMAT5Q9UDW3 170 aaKnown RBP6.87□□□□□ -1.31
SF3B3-201ENST00000302516 TBC1D29Q9UFV1 150 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 SLC22A13Q9Y226 551 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 TMEM218A2RU14 115 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 MAP1LC3B2A6NCE7 125 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 SIRPB1O00241 398 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 RNPS1Q15287 305 aaKnown RBP6.87□□□□□ -1.31
SF3B3-201ENST00000302516 CEBPEQ15744 281 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 WDR34Q96EX3 536 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 MAP1LC3BQ9GZQ8 125 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 IDSB3KWA1 339 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 K7ESM1 405 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 PHOX2AO14813 284 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF737O75373 536 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 NAT1P18440 290 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 TGFBR1P36897 503 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 PRSS36Q5K4E3 855 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 MAMSTRQ6ZN01 415 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 MYPOPQ86VE0 399 aaPredicted RBP6.87□□□□□ -1.31
SF3B3-201ENST00000302516 LANCL2Q9NS86 450 aa6.87□□□□□ -1.31
SF3B3-201ENST00000302516 FAM24AA6NFZ4 105 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 LEUTXA8MZ59 168 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 P2RY1P47900 373 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 IL24Q13007 206 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 NUFIP2Q7Z417 695 aaKnown RBP6.86□□□□□ -1.31
SF3B3-201ENST00000302516 UBE3DQ7Z6J8 389 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 LINC00596Q86U02 117 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 MUC20Q8N307 709 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-201ENST00000302516 BVESQ8NE79 360 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 OR2M7Q8NG81 312 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 SPACA9Q96E40 222 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-201ENST00000302516 PROCRQ9UNN8 238 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 PDE6DO43924 150 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 HMGA1P17096 107 aaKnown RBP6.86□□□□□ -1.31
SF3B3-201ENST00000302516 RFLNAQ6ZTI6 216 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 CARFQ8N187 725 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 C12orf49Q9H741 205 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 HEATR5BQ9P2D3 2071 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 RRP8O43159 456 aaKnown RBP6.86□□□□□ -1.31
SF3B3-201ENST00000302516 GLCCI1Q86VQ1 547 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 LSMEM1Q8N8F7 131 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 TAAR3PQ9P1P4 343 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 NAT8BQ9UHF3 227 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 SIGLEC7Q9Y286 467 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 RBFOX3A6NFN3 312 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 WNT1P04628 370 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 CD96P40200 585 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 EMP3P54852 163 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 SLC38A11Q08AI6 406 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 STUMQ69YW2 141 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 ESPL1Q14674 2120 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 LOC102723971A0A1B0GUV8 181 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 AQP7P3A6NL99 342 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 SBK3P0C264 359 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 SCGB1C2P0DMR2 95 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 OPRM1P35372 400 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 HMGA2P52926 109 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 OR1D5P58170 312 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 VMA21Q3ZAQ7 101 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF687Q8N1G0 1237 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 OR1L4Q8NGR5 311 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 CMBLQ96DG6 245 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 ADAT1Q9BUB4 502 aaKnown RBP6.86□□□□□ -1.31
SF3B3-201ENST00000302516 IGLV3-16A0A075B6K0 115 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 CDRT15L2A8MXV6 281 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 GUSBP08236 651 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 BHLHE23Q8NDY6 225 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 OR10D4PQ8NGN7 298 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 RASL12Q9NYN1 266 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 MYLKQ15746 1914 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 NCOR1O75376 2440 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 SP1P08047 785 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF718Q3SXZ3 478 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 NHLRC1Q6VVB1 395 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 OR4D10Q8NGI6 311 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 MMP25Q9NPA2 562 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 DUSP13Q9UII6 198 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 ANKRD20A5PA0PJZ0 165 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 G0S2P27469 103 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 INPP5JQ15735 1006 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF468Q5VIY5 522 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-201ENST00000302516 THOC3Q96J01 351 aaKnown RBP6.86□□□□□ -1.31
SF3B3-201ENST00000302516 OR10C1Q96KK4 312 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 TMEM147Q9BVK8 224 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 GPR87Q9BY21 358 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 OR51B4Q9Y5P0 310 aa6.86□□□□□ -1.31
SF3B3-201ENST00000302516 CBR3O75828 277 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 IGHA2P01877 340 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 C19orf57Q0VDD7 668 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 PPP1R1AQ13522 171 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 NPEPL1Q8NDH3 523 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 ADPRHL1Q8NDY3 354 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 OR5C1Q8NGR4 320 aa6.85□□□□□ -1.31
SF3B3-201ENST00000302516 RAB24Q969Q5 203 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms