RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 FAM60AQ9NP50 221 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 NRXN2Q9P2S2 1712 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 KIR2DS1A0A191URI9 304 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 UPK3AO75631 287 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 SNCAP37840 140 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 KIR2DS4P43632 304 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 PNLIPRP2P54317 469 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 SKP2Q13309 424 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 KIR2DS1Q14954 304 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 SLC36A1Q7Z2H8 476 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 FBXL14Q8N1E6 418 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 LINC00469Q8N7U9 141 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 ST8SIA1Q92185 356 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 RDH5Q92781 318 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 PACRGQ96M98 296 aaPredicted RBP13.59□□□□□ -0.23
DDB1-201ENST00000301764 RCC2Q9P258 522 aaKnown RBP13.59□□□□□ -0.23
DDB1-201ENST00000301764 EFSO43281 561 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 IGHV3-9P01782 118 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 NGFRP08138 427 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 DHODHQ02127 395 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 LTC4SQ16873 150 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 ZNF439Q8NDP4 499 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 ZNF107Q9UII5 783 aaPredicted RBP13.59□□□□□ -0.23
DDB1-201ENST00000301764 DTX4Q9Y2E6 619 aa13.59□□□□□ -0.23
DDB1-201ENST00000301764 ZNF320A2RRD8 509 aa13.58□□□□□ -0.23
DDB1-201ENST00000301764 HS3ST1O14792 307 aa13.58□□□□□ -0.23
DDB1-201ENST00000301764 GREM1O60565 184 aa13.58□□□□□ -0.23
DDB1-201ENST00000301764 FAM157BP0CG42 384 aa13.58□□□□□ -0.23
DDB1-201ENST00000301764 OTX2P32243 289 aa13.58□□□□□ -0.23
DDB1-201ENST00000301764 LPAR6P43657 344 aa13.58□□□□□ -0.23
DDB1-201ENST00000301764 ERVK-16P61578 105 aa13.58□□□□□ -0.23
DDB1-201ENST00000301764 POLR2GP62487 172 aaKnown RBP eCLIP13.58□□□□□ -0.23
DDB1-201ENST00000301764 PARM1Q6UWI2 310 aa13.58□□□□□ -0.23
DDB1-201ENST00000301764 TRBV5-5A0A0J9YX44 114 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 EML2O95834 649 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 HLA-DOBP13765 273 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 HNF1AP20823 631 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 LIMK1P53667 647 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 HLA-DRB3P79483 266 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 DLK1P80370 383 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 MESP2Q0VG99 397 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 TMEM196Q5HYL7 178 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 ZNF813Q6ZN06 617 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 CATSPERDQ86XM0 798 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 UNC13CQ8NB66 2214 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 A0A1W2PPC1 479 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 XKRY2A2RUG3 117 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 H3BQ15 152 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 PLRG1O43660 514 aaKnown RBP13.58□□□□□ -0.24
DDB1-201ENST00000301764 ABHD16AO95870 558 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 ACTL6AO96019 429 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 NRASP01111 189 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 EDN3P14138 238 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 TCN2P20062 427 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 KIAA0895LQ68EN5 471 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 SLC25A26Q70HW3 274 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 MAML2Q8IZL2 1156 aaPredicted RBP13.58□□□□□ -0.24
DDB1-201ENST00000301764 RHOVQ96L33 236 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 UCK1Q9HA47 277 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 ANKRD10Q9NXR5 420 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 PTRH2Q9Y3E5 179 aaKnown RBP13.58□□□□□ -0.24
DDB1-201ENST00000301764 PQLC2LA1A4F0 135 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 METTL15P1P0C7V9 234 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 PMS2P11Q13670 270 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 POC1BQ8TC44 478 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 CPT1CQ8TCG5 803 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 V9GYS6 101 aa13.58□□□□□ -0.24
DDB1-201ENST00000301764 OTOFQ9HC10 1997 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 HSBP1L1C9JCN9 74 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 RNF4P78317 190 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 COL13A1Q5TAT6 717 aaPredicted RBP13.57□□□□□ -0.24
DDB1-201ENST00000301764 DHRS7BQ6IAN0 325 aaPredicted RBP13.57□□□□□ -0.24
DDB1-201ENST00000301764 DHRS11Q6UWP2 260 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 OR10J5Q8NHC4 309 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.57□□□□□ -0.24
DDB1-201ENST00000301764 C8orf33Q9H7E9 229 aaPredicted RBP13.57□□□□□ -0.24
DDB1-201ENST00000301764 NAA60Q9H7X0 242 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 TMED3Q9Y3Q3 217 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 MYO16Q9Y6X6 1858 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 CYR61O00622 381 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 KLF4O43474 513 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 SULT1A2P50226 295 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 RRADP55042 308 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 PRSS12P56730 875 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 SHBQ15464 509 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 HIST1H2BAQ96A08 127 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 GSN-AS1Q9NRJ2 163 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 AHCTF1Q8WYP5 2266 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 C17orf112F2Z3M2 114 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 MMP7P09237 267 aaPredicted RBP13.57□□□□□ -0.24
DDB1-201ENST00000301764 MYOGP15173 224 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 ZNF574Q6ZN55 896 aaPredicted RBP13.57□□□□□ -0.24
DDB1-201ENST00000301764 UHRF2Q96PU4 802 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 RNF150Q9ULK6 438 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 TP53BP1Q12888 1972 aaPredicted RBP13.57□□□□□ -0.24
DDB1-201ENST00000301764 ZNF236Q9UL36 1845 aa13.57□□□□□ -0.24
DDB1-201ENST00000301764 H3BMH7 237 aa13.56□□□□□ -0.24
DDB1-201ENST00000301764 EIF1BO60739 113 aaKnown RBP13.56□□□□□ -0.24
DDB1-201ENST00000301764 PNPP00491 289 aa13.56□□□□□ -0.24
DDB1-201ENST00000301764 IGKV1D-16P01601 117 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms