RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 FAM166BA8MTA8 275 aa19.2■□□□□ 0.66
TPM4-201ENST00000300933 MT-CO3P00414 261 aa19.2■□□□□ 0.66
TPM4-201ENST00000300933 CRYBA1P05813 215 aa19.2■□□□□ 0.66
TPM4-201ENST00000300933 CASRP41180 1078 aa19.2■□□□□ 0.66
TPM4-201ENST00000300933 TAS2R19P59542 299 aa19.2■□□□□ 0.66
TPM4-201ENST00000300933 PLEKHN1Q494U1 663 aaPredicted RBP19.2■□□□□ 0.66
TPM4-201ENST00000300933 UQCC3Q6UW78 93 aa19.2■□□□□ 0.66
TPM4-201ENST00000300933 FJX1Q86VR8 437 aa19.2■□□□□ 0.66
TPM4-201ENST00000300933 EDARQ9UNE0 448 aa19.2■□□□□ 0.66
TPM4-201ENST00000300933 ARPC4-TTLL3A0A0A6YYG9 625 aa19.19■□□□□ 0.66
TPM4-201ENST00000300933 NFYBP25208 207 aa19.19■□□□□ 0.66
TPM4-201ENST00000300933 QRFPP83859 136 aa19.19■□□□□ 0.66
TPM4-201ENST00000300933 ZNF345Q14585 488 aa19.19■□□□□ 0.66
TPM4-201ENST00000300933 SNAI3Q3KNW1 292 aa19.19■□□□□ 0.66
TPM4-201ENST00000300933 C1QL2Q7Z5L3 287 aa19.19■□□□□ 0.66
TPM4-201ENST00000300933 CPNE2Q96FN4 548 aaPredicted RBP19.19■□□□□ 0.66
TPM4-201ENST00000300933 TREM1Q9NP99 234 aa19.19■□□□□ 0.66
TPM4-201ENST00000300933 RAB22AQ9UL26 194 aa19.19■□□□□ 0.66
TPM4-201ENST00000300933 CYB5AP00167 134 aa19.19■□□□□ 0.66
TPM4-201ENST00000300933 SWI5Q1ZZU3 235 aa19.19■□□□□ 0.66
TPM4-201ENST00000300933 IGSF11Q5DX21 431 aa19.19■□□□□ 0.66
TPM4-201ENST00000300933 C10orf128Q5T292 105 aa19.19■□□□□ 0.66
TPM4-201ENST00000300933 C9orf135Q5VTT2 229 aa19.19■□□□□ 0.66
TPM4-201ENST00000300933 FOXRED1Q96CU9 486 aaPredicted RBP19.19■□□□□ 0.66
TPM4-201ENST00000300933 MRPS28Q9Y2Q9 187 aaKnown RBP19.19■□□□□ 0.66
TPM4-201ENST00000300933 METTL21EPA6NDL7 271 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 ACTBP60709 375 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 LSM6P62312 80 aaKnown RBP19.18■□□□□ 0.66
TPM4-201ENST00000300933 ACTG1P63261 375 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 FOXO1Q12778 655 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 ZNF774Q6NX45 483 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 TRAPPC6BQ86SZ2 158 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 BPIFB2Q8N4F0 458 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 AKR7LQ8NHP1 331 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 EEF1E1-BLOC1S5C9J1V9 151 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 SOCS1O15524 211 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 NEURL1O76050 574 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 TNFSF15O95150 251 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 SPEM2Q0P670 501 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 ZNF260Q3ZCT1 412 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 HES3Q5TGS1 186 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 C20orf196Q8IYI0 205 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 INO80EQ8NBZ0 244 aaPredicted RBP19.18■□□□□ 0.66
TPM4-201ENST00000300933 OR14K1Q8NGZ2 314 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 NANPQ8TBE9 248 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 RXFP4Q8TDU9 374 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 CASTOR1Q8WTX7 329 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 GLYATL2Q8WU03 294 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 ASB13Q8WXK3 278 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 PHYHIPLQ96FC7 376 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 SLC6A7Q99884 636 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 A0A0A6YYD4 124 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 RAB19A4D1S5 217 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 ZNF736B4DX44 427 aaPredicted RBP19.18■□□□□ 0.66
TPM4-201ENST00000300933 HOXB1P14653 301 aaPredicted RBP19.18■□□□□ 0.66
TPM4-201ENST00000300933 GRB2P62993 217 aaKnown RBP19.18■□□□□ 0.66
TPM4-201ENST00000300933 TMEM164Q5U3C3 297 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 ZNF529Q6P280 563 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 AAED1Q7RTV5 226 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 FGFBP3Q8TAT2 258 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 SFT2D1Q8WV19 159 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 EDEM2Q9BV94 578 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 DDA1Q9BW61 102 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 MBD2Q9UBB5 411 aa19.18■□□□□ 0.66
TPM4-201ENST00000300933 DSPP15924 2871 aaKnown RBP19.17■□□□□ 0.66
TPM4-201ENST00000300933 ZNF716A6NP11 495 aa19.17■□□□□ 0.66
TPM4-201ENST00000300933 LINC00587B1AMM8 73 aa19.17■□□□□ 0.66
TPM4-201ENST00000300933 EIF3GO75821 320 aaKnown RBP eCLIP19.17■□□□□ 0.66
TPM4-201ENST00000300933 TGIF1Q15583 401 aa19.17■□□□□ 0.66
TPM4-201ENST00000300933 KCTD9Q7L273 389 aa19.17■□□□□ 0.66
TPM4-201ENST00000300933 NAXEQ8NCW5 288 aa19.17■□□□□ 0.66
TPM4-201ENST00000300933 MICU1Q9BPX6 476 aa19.17■□□□□ 0.66
TPM4-201ENST00000300933 SLC25A21Q9BQT8 299 aaPredicted RBP19.17■□□□□ 0.66
TPM4-201ENST00000300933 ZPBPQ9BS86 351 aa19.17■□□□□ 0.66
TPM4-201ENST00000300933 MOB1AQ9H8S9 216 aa19.17■□□□□ 0.66
TPM4-201ENST00000300933 OTOGLQ3ZCN5 2332 aa19.17■□□□□ 0.66
TPM4-201ENST00000300933 RIF1Q5UIP0 2472 aaKnown RBP19.17■□□□□ 0.66
TPM4-201ENST00000300933 GJE1A6NN92 205 aa19.17■□□□□ 0.66
TPM4-201ENST00000300933 M0R135 149 aa19.17■□□□□ 0.66
TPM4-201ENST00000300933 HGFACQ04756 655 aa19.17■□□□□ 0.66
TPM4-201ENST00000300933 PDZK1IP1Q13113 114 aa19.17■□□□□ 0.66
TPM4-201ENST00000300933 DHRS7BQ6IAN0 325 aaPredicted RBP19.17■□□□□ 0.66
TPM4-201ENST00000300933 PIGTQ969N2 578 aa19.17■□□□□ 0.66
TPM4-201ENST00000300933 ZNF799Q96GE5 643 aa19.17■□□□□ 0.66
TPM4-201ENST00000300933 PQLC2LA1A4F0 135 aa19.16■□□□□ 0.66
TPM4-201ENST00000300933 ZNF705EA8MWA4 302 aaPredicted RBP19.16■□□□□ 0.66
TPM4-201ENST00000300933 FARS2O95363 451 aaKnown RBP19.16■□□□□ 0.66
TPM4-201ENST00000300933 SLC25A4P12235 298 aa19.16■□□□□ 0.66
TPM4-201ENST00000300933 CBR1P16152 277 aa19.16■□□□□ 0.66
TPM4-201ENST00000300933 ZNF84P51523 738 aa19.16■□□□□ 0.66
TPM4-201ENST00000300933 S100A12P80511 92 aa19.16■□□□□ 0.66
TPM4-201ENST00000300933 UBE2V2Q15819 145 aa19.16■□□□□ 0.66
TPM4-201ENST00000300933 ABHD17BQ5VST6 288 aa19.16■□□□□ 0.66
TPM4-201ENST00000300933 ZNF584Q8IVC4 421 aa19.16■□□□□ 0.66
TPM4-201ENST00000300933 OR2V1Q8NHB1 315 aa19.16■□□□□ 0.66
TPM4-201ENST00000300933 CRTAPO75718 401 aaPredicted RBP19.16■□□□□ 0.66
TPM4-201ENST00000300933 PGAM2P15259 253 aa19.16■□□□□ 0.66
TPM4-201ENST00000300933 MICBQ29980 383 aa19.16■□□□□ 0.66
TPM4-201ENST00000300933 DOK3Q7L591 496 aa19.16■□□□□ 0.66
TPM4-201ENST00000300933 OR13C8Q8NGS7 320 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms