RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 MMP7P09237 267 aaPredicted RBP13.97□□□□□ -0.17
USP43-201ENST00000285199 ATG4DQ86TL0 474 aaPredicted RBP13.97□□□□□ -0.17
USP43-201ENST00000285199 LHX4Q969G2 390 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 SLC35B3Q9H1N7 401 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 OR2M5A3KFT3 312 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 TLCD2A6NGC4 264 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 MSGN1A6NI15 193 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 PLRG1O43660 514 aaKnown RBP13.97□□□□□ -0.17
USP43-201ENST00000285199 SCRG1O75711 98 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 DRD1P21728 446 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 RPS11P62280 158 aaKnown RBP eCLIP13.97□□□□□ -0.17
USP43-201ENST00000285199 SSBP1Q04837 148 aaKnown RBP13.97□□□□□ -0.17
USP43-201ENST00000285199 LPAL2Q16609 132 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 ARTNQ5T4W7 220 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 ZNF383Q8NA42 475 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 RSPO3Q9BXY4 272 aaPredicted RBP13.97□□□□□ -0.17
USP43-201ENST00000285199 PLEKHA2Q9HB19 425 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 HSF4Q9ULV5 492 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 PPP1R3CQ9UQK1 317 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 RBBP6Q7Z6E9 1792 aaKnown RBP13.97□□□□□ -0.17
USP43-201ENST00000285199 FAM157BP0CG42 384 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 SLC35A1P78382 337 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 RPL19P84098 196 aaKnown RBP13.97□□□□□ -0.17
USP43-201ENST00000285199 DRAM2Q6UX65 266 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 ANKRD33Q7Z3H0 272 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 YRDCQ86U90 279 aaKnown RBP13.97□□□□□ -0.17
USP43-201ENST00000285199 APCDD1LQ8NCL9 501 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 SLC26A10Q8NG04 563 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 PLPPR2Q96GM1 343 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 SNX22Q96L94 193 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 IP6K3Q96PC2 410 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 SPSB2Q99619 263 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 SMIM7Q9BQ49 75 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 ZNF236Q9UL36 1845 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 SBF1O95248 1867 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 PARP14Q460N5 1801 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 HBE1P02100 147 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 IL11P20809 199 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 COL9A1P20849 921 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 RBP2P50120 134 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 BAXQ07812 192 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 SKA3Q8IX90 412 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 OR5C1Q8NGR4 320 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 RAB18Q9NP72 206 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 TRAPPC2LQ9UL33 140 aa13.97□□□□□ -0.17
USP43-201ENST00000285199 A0A096LPE4 126 aa13.96□□□□□ -0.17
USP43-201ENST00000285199 NSG1A0A0A6YYJ2 146 aa13.96□□□□□ -0.17
USP43-201ENST00000285199 A0A1W2PPZ6 126 aa13.96□□□□□ -0.17
USP43-201ENST00000285199 LPAR6P43657 344 aa13.96□□□□□ -0.17
USP43-201ENST00000285199 ZNF684Q5T5D7 378 aa13.96□□□□□ -0.17
USP43-201ENST00000285199 EDAQ92838 391 aa13.96□□□□□ -0.17
USP43-201ENST00000285199 ALKBH3Q96Q83 286 aaPredicted RBP13.96□□□□□ -0.17
USP43-201ENST00000285199 OSGIN2Q9Y236 505 aa13.96□□□□□ -0.17
USP43-201ENST00000285199 CACNA1HO95180 2353 aa13.96□□□□□ -0.17
USP43-201ENST00000285199 LYZL2Q7Z4W2 148 aa13.96□□□□□ -0.17
USP43-201ENST00000285199 MRGPREQ86SM8 312 aa13.96□□□□□ -0.17
USP43-201ENST00000285199 ANKRD36A6QL64 1941 aa13.96□□□□□ -0.17
USP43-201ENST00000285199 MPTX1A8MV57 137 aa13.96□□□□□ -0.18
USP43-201ENST00000285199 LINC01565O15544 149 aa13.96□□□□□ -0.18
USP43-201ENST00000285199 FPR2P25090 351 aa13.96□□□□□ -0.18
USP43-201ENST00000285199 MPGP29372 298 aa13.96□□□□□ -0.18
USP43-201ENST00000285199 INSM1Q01101 510 aaPredicted RBP13.96□□□□□ -0.18
USP43-201ENST00000285199 MYBPHQ13203 477 aa13.96□□□□□ -0.18
USP43-201ENST00000285199 ZNF141Q15928 474 aa13.96□□□□□ -0.18
USP43-201ENST00000285199 ZNF813Q6ZN06 617 aa13.96□□□□□ -0.18
USP43-201ENST00000285199 WDR5BQ86VZ2 330 aa13.96□□□□□ -0.18
USP43-201ENST00000285199 RGPD3A6NKT7 1758 aaPredicted RBP13.96□□□□□ -0.18
USP43-201ENST00000285199 RGPD4Q7Z3J3 1758 aa13.96□□□□□ -0.18
USP43-201ENST00000285199 PNLIPP16233 465 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 NHLH2Q02577 135 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 ZSCAN4Q8NAM6 433 aaPredicted RBP13.95□□□□□ -0.18
USP43-201ENST00000285199 OR10C1Q96KK4 312 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 WDR13Q9H1Z4 485 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 OR5H15A6NDH6 313 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 PRR32B1ATL7 298 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 CDC14BO60729 498 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 B4GALT1P15291 398 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 KIAA0895LQ68EN5 471 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 ZNF66Q6ZN08 573 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 LFNGQ8NES3 379 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 TNFRSF10CO14798 259 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 RAC2P15153 192 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 AADACP22760 399 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 ZNF787Q6DD87 383 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 Q6ZS52 159 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 Q7L0L9 218 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 FAM185AQ8N0U4 392 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 BCO1Q9HAY6 547 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 SLCO1B1Q9Y6L6 691 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 ABCA7Q8IZY2 2146 aa13.95□□□□□ -0.18
USP43-201ENST00000285199 ABHD16AO95870 558 aa13.94□□□□□ -0.18
USP43-201ENST00000285199 TFAP2EQ6VUC0 442 aa13.94□□□□□ -0.18
USP43-201ENST00000285199 OR4F5Q8NH21 305 aa13.94□□□□□ -0.18
USP43-201ENST00000285199 OR4F4Q96R69 305 aa13.94□□□□□ -0.18
USP43-201ENST00000285199 SLC17A5Q9NRA2 495 aa13.94□□□□□ -0.18
USP43-201ENST00000285199 RNF150Q9ULK6 438 aa13.94□□□□□ -0.18
USP43-201ENST00000285199 BTBD17A6NE02 478 aa13.94□□□□□ -0.18
USP43-201ENST00000285199 KLF4O43474 513 aa13.94□□□□□ -0.18
USP43-201ENST00000285199 PDGFBP01127 241 aaPredicted RBP13.94□□□□□ -0.18
USP43-201ENST00000285199 TBPP20226 339 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms