RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 PINLYPA6NC86 204 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 AQP7P3A6NL99 342 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 P04436 131 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 SPP1P10451 314 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 PDZK1IP1Q13113 114 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 TMEM164Q5U3C3 297 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 ZNF585AQ6P3V2 769 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 SMIM8Q96KF7 97 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 PARD6AQ9NPB6 346 aa16.07■□□□□ 0.16
PDLIM3-201ENST00000284767 TNFSF11O14788 317 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 F12P00748 615 aaPredicted RBP16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 SERPINA7P05543 415 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 CRYBA1P05813 215 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 GSTP1P09211 210 aaKnown RBP16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 CAV2P51636 162 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 CLDN17P56750 224 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 EIF5AP63241 154 aaKnown RBP16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 ZNF529Q6P280 563 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 NOXO1Q8NFA2 376 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 OR5D14Q8NGL3 314 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 OXGR1Q96P68 337 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 SCGB3A2Q96PL1 93 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 TMEM231Q9H6L2 316 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 RHOFQ9HBH0 211 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 RTTNQ86VV8 2226 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 CNOT1A5YKK6 2376 aaKnown RBP16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 A0A0J9YW62 118 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 SYT7O43581 403 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 TTRP02766 147 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 GFOD2Q3B7J2 385 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 RXFP4Q8TDU9 374 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 ADAT3Q96EY9 351 aaPredicted RBP16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 SGCZQ96LD1 299 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 C5orf66Q9H5L9 145 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 DNAJB11Q9UBS4 358 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 FLVCR1Q9Y5Y0 555 aa16.06■□□□□ 0.16
PDLIM3-201ENST00000284767 A0A087WZY1 265 aa16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 PRSS44E7EML9 344 aa16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 CBR3O75828 277 aa16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 IGHG1P01857 330 aa16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 CD63P08962 238 aa16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 EIF5AL1Q6IS14 154 aaKnown RBP16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 TMEM230Q96A57 120 aa16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 ZNF385AQ96PM9 386 aaKnown RBP16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 MEX3AA1L020 520 aaKnown RBP16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 MSGN1A6NI15 193 aa16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 PET100P0DJ07 73 aa16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 SLC35A1P78382 337 aa16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 H3F3AP84243 136 aa16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 TRIP6Q15654 476 aaKnown RBP16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 KLHL24Q6TFL4 600 aa16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 CLEC18BQ6UXF7 455 aa16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 OR10S1Q8NGN2 331 aa16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 CMSS1Q9BQ75 279 aaKnown RBP16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 HES7Q9BYE0 225 aa16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 SRXN1Q9BYN0 137 aa16.05■□□□□ 0.16
PDLIM3-201ENST00000284767 LRRC3CA6NJW4 275 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 ANGPTL5Q86XS5 388 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 ADPRHL1Q8NDY3 354 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 SFT2D1Q8WV19 159 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 TMEM41AQ96HV5 264 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 TERTO14746 1132 aaKnown RBP16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 TRAPPC6AO75865 159 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 QDPRP09417 244 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 FOLR2P14207 255 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 MUC1P15941 1255 aaPredicted RBP16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 FPR2P25090 351 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 LAP3P28838 519 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 ZNF93P35789 620 aaPredicted RBP16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 CYB561P49447 251 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 PHYHD1Q5SRE7 291 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 THEM4Q5T1C6 240 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 ATP1A1-AS1Q5TC04 95 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 NAA40Q86UY6 237 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 OR10H5Q8NGA6 315 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 OR14L1PQ8NHC6 308 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 MICU1Q9BPX6 476 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 SLC5A7Q9GZV3 580 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 PBOV1Q9GZY1 135 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 LPAR5Q9H1C0 372 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 HRH4Q9H3N8 390 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 RNF122Q9H9V4 155 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 OR5AC2Q9NZP5 309 aa16.04■□□□□ 0.16
PDLIM3-201ENST00000284767 TAAR5O14804 337 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 CSTBP04080 98 aaKnown RBP16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 ANOS1P23352 680 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 PAX6P26367 422 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 B3GALT5-AS1P59052 145 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 WIPI1Q5MNZ9 446 aaPredicted RBP16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 PEG10Q86TG7 708 aaKnown RBP16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 ZNF101Q8IZC7 436 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 OR13C9Q8NGT0 318 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 OR6X1Q8NH79 312 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 ROBO4Q8WZ75 1007 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 SIGLEC12Q96PQ1 595 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 LHFPL6Q9Y693 200 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 ZNF726A6NNF4 738 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 ADAP1O75689 374 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 FARS2O95363 451 aaKnown RBP16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 KCNJ3P48549 501 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms