RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 FSTP19883 344 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 GCH1P30793 250 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 RSU1Q15404 277 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 OR5L1Q8NGL2 311 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 NEDD4LQ96PU5 975 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 SP140LQ9H930 580 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 SPRY3O43610 288 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 PLAUP00749 431 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 CSTBP04080 98 aaKnown RBP11.4□□□□□ -0.58
ACER3-201ENST00000278544 KRTAP27-1Q3LI81 207 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 PRAMEF6Q5VXH4 476 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 ZNF611Q8N823 705 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 OR51T1Q8NGJ9 327 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 ZFAND2BQ8WV99 257 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 NUDCD2Q8WVJ2 157 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 PP6455Q8WZ26 134 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 BEX2Q9BXY8 128 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 BEX1Q9HBH7 125 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 TBCCD1Q9NVR7 557 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 RBFOX1Q9NWB1 397 aaKnown RBP11.4□□□□□ -0.58
ACER3-201ENST00000278544 TMEM8BA6NDV4 472 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 CNOT4O95628 575 aaKnown RBP11.4□□□□□ -0.58
ACER3-201ENST00000278544 THBDP07204 575 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 OR8B8Q15620 311 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 TRIM16LQ309B1 348 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 CRIP3Q6Q6R5 217 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 ZDHHC23Q8IYP9 409 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 KCTD12Q96CX2 325 aaKnown RBP11.4□□□□□ -0.58
ACER3-201ENST00000278544 THAP7Q9BT49 309 aaPredicted RBP11.4□□□□□ -0.58
ACER3-201ENST00000278544 DOPEY2Q9Y3R5 2298 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 IGKV1-12A0A0C4DH73 117 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 hCG_1807616A0A1W2PRN6 198 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 IGKV1D-12P01611 117 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 ERCC1P07992 297 aaPredicted RBP11.39□□□□□ -0.59
ACER3-201ENST00000278544 ZNF35P13682 527 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 TAS2R20P59543 309 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 RIN1Q13671 783 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 OR2Z1Q8NG97 314 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 MMP28Q9H239 520 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 MCUBQ9NWR8 336 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 ATP23Q9Y6H3 246 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 PTPN13Q12923 2485 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 DPRXA6NFQ7 191 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 CDIPTO14735 213 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 SFTPCP11686 197 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 CFL1P23528 166 aaKnown RBP11.39□□□□□ -0.59
ACER3-201ENST00000278544 ALDH3B1P43353 468 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 MPPED2Q15777 294 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 RGS21Q2M5E4 152 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 SPRNQ5BIV9 151 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 CROCCP3Q8IVE0 287 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 STEAP2Q8NFT2 490 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 TMEM59Q9BXS4 323 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 NKIRAS2Q9NYR9 191 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 ERRFI1Q9UJM3 462 aaPredicted RBP11.39□□□□□ -0.59
ACER3-201ENST00000278544 DOPEY1Q5JWR5 2465 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 COX5BP10606 129 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 MGMTP16455 207 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 CD40P25942 277 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 ETV6P41212 452 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 MNDAP41218 407 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 RGS7BPQ6MZT1 257 aaPredicted RBP11.39□□□□□ -0.59
ACER3-201ENST00000278544 EGFL6Q8IUX8 553 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 CENPSQ8N2Z9 138 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 NKAIN3Q8N8D7 197 aa11.39□□□□□ -0.59
ACER3-201ENST00000278544 HLA-DQB1P01920 261 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 NAT2P11245 290 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 ZNF12P17014 697 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 TMEM211Q6ICI0 200 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 XKRXQ6PP77 449 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 C5orf24Q7Z6I8 188 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 NRARPQ7Z6K4 114 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 FBXL14Q8N1E6 418 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 GVQW1Q8N7I0 195 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 THRSPQ92748 146 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 WDFY2Q96P53 400 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 ADAT1Q9BUB4 502 aaKnown RBP11.38□□□□□ -0.59
ACER3-201ENST00000278544 CHD3Q12873 2000 aaKnown RBP11.38□□□□□ -0.59
ACER3-201ENST00000278544 A0A0A6YYD4 124 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 RAD52P43351 418 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 CNN3Q15417 329 aaKnown RBP11.38□□□□□ -0.59
ACER3-201ENST00000278544 C6orf201Q7Z4U5 140 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 C1orf162Q8NEQ5 155 aaPredicted RBP11.38□□□□□ -0.59
ACER3-201ENST00000278544 OR5T2Q8NGG2 359 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 HAVCR1Q96D42 359 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 PLPPR2Q96GM1 343 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 MARS2Q96GW9 593 aaKnown RBP11.38□□□□□ -0.59
ACER3-201ENST00000278544 DIABLOQ9NR28 239 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 ZNF230Q9UIE0 474 aaPredicted RBP11.38□□□□□ -0.59
ACER3-201ENST00000278544 HELZ2Q9BYK8 2649 aaKnown RBP11.38□□□□□ -0.59
ACER3-201ENST00000278544 MT-ND4P03905 459 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 BCL3P20749 454 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 HLA-DMAP28067 261 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 PTH2RP49190 550 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 ATAD3CQ5T2N8 411 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 FAM166AQ6J272 317 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 OR4S1Q8NGB4 309 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 UBASH3BQ8TF42 649 aa11.38□□□□□ -0.59
ACER3-201ENST00000278544 HDHD3Q9BSH5 251 aaPredicted RBP11.38□□□□□ -0.59
ACER3-201ENST00000278544 C11orf54Q9H0W9 315 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms