RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 SLC25A31Q9H0C2 315 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 B9D1Q9UPM9 204 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 SLC22A13Q9Y226 551 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 POMT1Q9Y6A1 747 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 TMED7-TICAM2A0A0A6YYA0 188 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 A0A1W2PR77 199 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 WIPF3A6NGB9 483 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 LMO7DNF2Z398 122 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 TOX3O15405 576 aaPredicted RBP6.73□□□□□ -1.33
TRIM6-201ENST00000278302 DLEU1O43261 78 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 IGKV3-11P04433 115 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 IFNA6P05013 189 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 PGA3P0DJD8 388 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 HKR1P10072 659 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 MAS1LP35410 378 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 ARRB1P49407 418 aaPredicted RBP6.73□□□□□ -1.33
TRIM6-201ENST00000278302 RPL27P61353 136 aaKnown RBP6.73□□□□□ -1.33
TRIM6-201ENST00000278302 CYCSP99999 105 aaKnown RBP6.73□□□□□ -1.33
TRIM6-201ENST00000278302 SPEM2Q0P670 501 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 ACKR1Q16570 336 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 RPUSD3Q6P087 351 aaKnown RBP6.73□□□□□ -1.33
TRIM6-201ENST00000278302 SHISA6Q6ZSJ9 500 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 C9orf40Q8IXQ3 194 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 ZNF101Q8IZC7 436 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 OR1L3Q8NH93 324 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 OTOSQ8NHW6 89 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 RNF128Q8TEB7 428 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 AMELYQ99218 206 aa6.73□□□□□ -1.33
TRIM6-201ENST00000278302 TRBV5-7A0A0A0MS05 114 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 H3BQ15 152 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 CST4P01036 141 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 HTR2CP28335 458 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 FCGR2CP31995 323 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 POLR2HP52434 150 aaKnown RBP6.72□□□□□ -1.33
TRIM6-201ENST00000278302 TMEM33P57088 247 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 RAB1AP62820 205 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 SSBP1Q04837 148 aaKnown RBP6.72□□□□□ -1.33
TRIM6-201ENST00000278302 HAGHQ16775 308 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 KIF26BQ2KJY2 2108 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 ANKRD55Q3KP44 614 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 WDR38Q5JTN6 314 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 SLC18B1Q6NT16 456 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 CLEC18BQ6UXF7 455 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 SUMF2Q8NBJ7 301 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 OR5R1Q8NH85 324 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 WWTR1Q9GZV5 400 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 SH3BGRL3Q9H299 93 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 ZNF576Q9H609 170 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 RAB22AQ9UL26 194 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 CACNA1IQ9P0X4 2223 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 ELOA3CA0A087WX78 387 aaPredicted RBP6.72□□□□□ -1.33
TRIM6-201ENST00000278302 IGKV3D-11A0A0A0MRZ8 115 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 PRSS37A4D1T9 235 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 ALG1L2C9J202 215 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 TSPAN2O60636 221 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 AHSA1O95433 338 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 MT-ATP6P00846 226 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 COL4A2P08572 1712 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 RAB4AP20338 218 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 RPL12P30050 165 aaKnown RBP6.72□□□□□ -1.33
TRIM6-201ENST00000278302 KIR3DL2P43630 455 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 RGS19P49795 217 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 UBE2KP61086 200 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 SPOCK1Q08629 439 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 SLC17A1Q14916 467 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 JOSD1Q15040 202 aaPredicted RBP6.72□□□□□ -1.33
TRIM6-201ENST00000278302 NUP54Q7Z3B4 507 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 PLXDC1Q8IUK5 500 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 C17orf78Q8N4C9 275 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 ZNF248Q8NDW4 579 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 LYPD6BQ8NI32 183 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 MCHR2Q969V1 340 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 ERGIC1Q969X5 290 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 C4orf45Q96LM5 186 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 RFNGQ9Y644 331 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 CCDC187A0A096LP49 1063 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 A8MVM7 634 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 K7EPK0 472 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 RAB27BO00194 218 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 OR4A8P0C604 315 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 MYF5P13349 255 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 FOLR1P15328 257 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 CHATP28329 748 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 EIF5AP63241 154 aaKnown RBP6.72□□□□□ -1.33
TRIM6-201ENST00000278302 COTL1Q14019 142 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 SGCBQ16585 318 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 C1orf140Q5VVS0 124 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 NCR3LG1Q68D85 454 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 KCTD18Q6PI47 426 aaPredicted RBP6.72□□□□□ -1.33
TRIM6-201ENST00000278302 OGFOD3Q6PK18 319 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 FAM71E2Q8N5Q1 922 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 ZDHHC22Q8N966 263 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 OR1N1Q8NGS0 311 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 OR2I1PQ8NGU4 316 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 POC1BQ8TC44 478 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 M1APQ8TC57 530 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 NOL4LQ96MY1 436 aaPredicted RBP6.72□□□□□ -1.33
TRIM6-201ENST00000278302 OR8B4Q96RC9 309 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 OR11A1Q9GZK7 315 aa6.72□□□□□ -1.33
TRIM6-201ENST00000278302 CHRNA10Q9GZZ6 450 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms