RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 UQCC1Q9NVA1 299 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 TBC1D29Q9UFV1 150 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 DYSFO75923 2080 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 M0QZK8 103 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 GGCTO75223 188 aaKnown RBP7.18□□□□□ -1.26
LIMD1-201ENST00000273317 SPCS3P61009 180 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 GUK1Q16774 197 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 RFLNAQ6ZTI6 216 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 B9D1Q9UPM9 204 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 DUXBA0A1W2PPF3 345 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 OR2M5A3KFT3 312 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 SMIM6P0DI80 62 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 PNRC1Q12796 327 aaPredicted RBP7.18□□□□□ -1.26
LIMD1-201ENST00000273317 PTOV1Q86YD1 416 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 PIK3IP1Q96FE7 263 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 TEX101Q9BY14 249 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 ABCA4P78363 2273 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 ARID2Q68CP9 1835 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 FAM24AA6NFZ4 105 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 B4DEV8 164 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 M0R1B8 84 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 ZNF207O43670 478 aaKnown RBP7.18□□□□□ -1.26
LIMD1-201ENST00000273317 SP1P08047 785 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 TNFRSF1AP19438 455 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 PPIAP62937 165 aaKnown RBP7.18□□□□□ -1.26
LIMD1-201ENST00000273317 TMEM272A0A1B0GTI8 110 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 PYCARD-AS1I3L0S3 204 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 TMPRSS11DO60235 418 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 FABP4P15090 132 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 OPRM1P35372 400 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 HAAOP46952 286 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 CD300LDQ6UXZ3 194 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 GSX1Q9H4S2 264 aaPredicted RBP7.18□□□□□ -1.26
LIMD1-201ENST00000273317 TNFSF11O14788 317 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 IL2RAP01589 272 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 DSCR4P56555 118 aaPredicted RBP7.18□□□□□ -1.26
LIMD1-201ENST00000273317 TMEM88Q6PEY1 159 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 NHLRC1Q6VVB1 395 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 SLC25A26Q70HW3 274 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 OR13H1Q8NG92 308 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 LRFN3Q9BTN0 628 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 PRR14Q9BWN1 585 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.18□□□□□ -1.26
LIMD1-201ENST00000273317 MMP17Q9ULZ9 603 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 A6NDN8 102 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 B4GALT1P15291 398 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 AREGP15514 252 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 RPL7P18124 248 aaKnown RBP7.18□□□□□ -1.26
LIMD1-201ENST00000273317 AGFG1P52594 562 aaKnown RBP7.18□□□□□ -1.26
LIMD1-201ENST00000273317 IL13RA2Q14627 380 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 DOLPP1Q86YN1 238 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 SIGLEC11Q96RL6 698 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 MAGT1Q9H0U3 335 aa7.18□□□□□ -1.26
LIMD1-201ENST00000273317 TBX19O60806 448 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 TMEM241Q24JQ0 296 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 TCTN3Q6NUS6 607 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 MAP1LC3B2A6NCE7 125 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 AKR7A2O43488 359 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 HSBP1O75506 76 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 KCNAB1Q14722 419 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 BCL7CQ8WUZ0 217 aaPredicted RBP7.17□□□□□ -1.26
LIMD1-201ENST00000273317 CMBLQ96DG6 245 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 MAP1LC3BQ9GZQ8 125 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 DHCR7Q9UBM7 475 aaKnown RBP7.17□□□□□ -1.26
LIMD1-201ENST00000273317 ZNF236Q9UL36 1845 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 LBX1P52954 281 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 SLC38A11Q08AI6 406 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 CCSMST1Q4G0I0 132 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 ZCCHC14Q8WYQ9 949 aaKnown RBP7.17□□□□□ -1.26
LIMD1-201ENST00000273317 TMEM230Q96A57 120 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 PRRX2Q99811 253 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 OR51B4Q9Y5P0 310 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 INSM1Q01101 510 aaPredicted RBP7.17□□□□□ -1.26
LIMD1-201ENST00000273317 ELOBQ15370 118 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 FAM74A3Q4VXF1 159 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 SLC16A12Q6ZSM3 486 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 RLN3Q8WXF3 142 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 UBE2FQ969M7 185 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 ANAPC16Q96DE5 110 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 GRAMD2BQ96HH9 432 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 ADAT1Q9BUB4 502 aaKnown RBP7.17□□□□□ -1.26
LIMD1-201ENST00000273317 NRSN2Q9GZP1 204 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 NAA60Q9H7X0 242 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 AMMECR1Q9Y4X0 333 aaPredicted RBP7.17□□□□□ -1.26
LIMD1-201ENST00000273317 K7ESM1 405 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 CRYAAP02489 173 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 SURF2Q15527 256 aaPredicted RBP7.17□□□□□ -1.26
LIMD1-201ENST00000273317 CEBPEQ15744 281 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 LINC00303Q3SY05 128 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 MRM1Q6IN84 353 aaKnown RBP7.17□□□□□ -1.26
LIMD1-201ENST00000273317 CORO6Q6QEF8 472 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 OR2V1Q8NHB1 315 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 UPK1AO00322 258 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 EPHA2P29317 976 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 DPPA3Q6W0C5 159 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 OR5D13Q8NGL4 314 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 OR1L4Q8NGR5 311 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 MOB3AQ96BX8 217 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 GPR137Q96N19 417 aa7.17□□□□□ -1.26
LIMD1-201ENST00000273317 MENTQ9BUN1 341 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms