RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 DYNC1I1O14576 645 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 GSC2O15499 205 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 WIPF1O43516 503 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 ZNF254O75437 659 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 RHBDL1O75783 438 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 DNAJC8O75937 253 aaPredicted RBP7.99□□□□□ -1.13
VPS41-201ENST00000265745 IGHV4-59P01825 116 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 ACAA1P09110 424 aaPredicted RBP7.99□□□□□ -1.13
VPS41-201ENST00000265745 ATP6V1B1P15313 513 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 IER3P46695 156 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 GPM6AP51674 278 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 RPL15P61313 204 aaKnown RBP7.99□□□□□ -1.13
VPS41-201ENST00000265745 EFNB1P98172 346 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 PTGES3Q15185 160 aaKnown RBP7.99□□□□□ -1.13
VPS41-201ENST00000265745 CEACAM21Q3KPI0 293 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 C1orf122Q6ZSJ8 110 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 LDLRAD3Q86YD5 345 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 ZNF679Q8IYX0 411 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 CMTM4Q8IZR5 234 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 KIR3DL3Q8N743 410 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 Q8N7P7 452 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 FAM81AQ8TBF8 368 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 BCAS4Q8TDM0 211 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 ASB17Q8WXJ9 295 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 DYRK2Q92630 601 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 MED30Q96HR3 178 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 OR8B4Q96RC9 309 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 BEX1Q9HBH7 125 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 FAM53CQ9NYF3 392 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 ONECUT1Q9UBC0 465 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 COPS3Q9UNS2 423 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 TMEM14AQ9Y6G1 99 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 IGKV1D-17A0A075B6S4 117 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 CLPSL1A2RUU4 121 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 OR2AT4A6NND4 320 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 ZNF732B4DXR9 585 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 SIGLEC5O15389 551 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 PRKYO43930 277 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 GPR137BO60478 399 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 KNG1P01042 644 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 IGLV3-1P01715 115 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 TFF1P04155 84 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 MRPL3P09001 348 aaKnown RBP7.98□□□□□ -1.13
VPS41-201ENST00000265745 GLRA1P23415 457 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 EPHA2P29317 976 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 CAV3P56539 151 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 ESRRGP62508 458 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 GNG3P63215 75 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 PRB3Q04118 309 aaPredicted RBP7.98□□□□□ -1.13
VPS41-201ENST00000265745 SRSF4Q08170 494 aaKnown RBP7.98□□□□□ -1.13
VPS41-201ENST00000265745 RIPPLY1Q0D2K3 151 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 DGUOKQ16854 277 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 DMRTC1Q5HYR2 192 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 CEP78Q5JTW2 689 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 AADACL4Q5VUY2 407 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 OLFML2AQ68BL7 652 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 TREML4Q6UXN2 200 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 MEPCEQ7L2J0 689 aaKnown RBP7.98□□□□□ -1.13
VPS41-201ENST00000265745 BCDIN3DQ7Z5W3 292 aaKnown RBP7.98□□□□□ -1.13
VPS41-201ENST00000265745 OR5A2Q8NGI9 324 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 ZNF671Q8TAW3 534 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 OR51E1Q8TCB6 317 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 NPRL2Q8WTW4 380 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 WFDC12Q8WWY7 111 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 TNFRSF14Q92956 283 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 GAFA1Q96PS6 74 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 CADM1Q9BY67 442 aaKnown RBP7.98□□□□□ -1.13
VPS41-201ENST00000265745 PBOV1Q9GZY1 135 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 GPR84Q9NQS5 396 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 SIRT7Q9NRC8 400 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 NLKQ9UBE8 527 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 SLC25A10Q9UBX3 287 aaPredicted RBP7.98□□□□□ -1.13
VPS41-201ENST00000265745 NUFIP1Q9UHK0 495 aaKnown RBP7.98□□□□□ -1.13
VPS41-201ENST00000265745 FAM96BQ9Y3D0 163 aa7.98□□□□□ -1.13
VPS41-201ENST00000265745 MEGF8Q7Z7M0 2845 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 PKD1L1Q8TDX9 2849 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 NKX6-3A6NJ46 265 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 OR5B21A6NL26 309 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 RNASEK-C17orf49H0YIS7 233 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 MITFO75030 526 aaPredicted RBP7.97□□□□□ -1.13
VPS41-201ENST00000265745 SRSF10O75494 262 aaKnown RBP7.97□□□□□ -1.13
VPS41-201ENST00000265745 TTRP02766 147 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 PSG2P11465 335 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 FAHP16930 419 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 RIDAP52758 137 aaKnown RBP7.97□□□□□ -1.13
VPS41-201ENST00000265745 DLX1P56177 255 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 MFGE8Q08431 387 aaPredicted RBP7.97□□□□□ -1.13
VPS41-201ENST00000265745 BNIP1Q12981 228 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 ATP6AP1Q15904 470 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 ZNF829Q3KNS6 432 aaPredicted RBP7.97□□□□□ -1.13
VPS41-201ENST00000265745 ANKRD39Q53RE8 183 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 LCN1P1Q5VSP4 162 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 SLX4IPQ5VYV7 408 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 ZNF322Q6U7Q0 402 aaPredicted RBP7.97□□□□□ -1.13
VPS41-201ENST00000265745 C17orf107Q6ZR85 190 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 MOB3CQ70IA8 216 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 THAP5Q7Z6K1 395 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 ZNRF1Q8ND25 227 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 BVESQ8NE79 360 aa7.97□□□□□ -1.13
VPS41-201ENST00000265745 OR5K1Q8NHB7 308 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms